FC876525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876525 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 36/116 (31.03%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 375 AVANCLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNMXXXXXXXXXXXXXXXXXXLSVCHG 722 A A +N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++ FR+Q + +W +N CHG Sbjct: 98 AQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212
BLAST of FC876525 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11 Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = -1 Query: 447 AVANCLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 722 A+ +N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + F+ + R M ++N+ Sbjct: 97 ALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187
BLAST of FC876525 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 450 LKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQN 683 L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S++ F+ ++RK+W QN Sbjct: 112 LEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187
BLAST of FC876525 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 32/92 (34.78%), Postives = 58/92 (63.04%), Query Frame = -1 Query: 447 AVANCLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTKMRRKMWIQNM 722 A+ +N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ + R M ++N+ Sbjct: 97 ALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNV 187 The following BLAST results are available for this feature:
BLAST of FC876525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876525 ID=FC876525; Name=FC876525; organism=Citrus clementina; type=EST; length=722bpback to top |