FC876606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOLU (ATP-dependent RNA helicase rhlB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOLI (ATP-dependent RNA helicase rhlB OS=Escherichia coli (strain K12) GN=rhlB PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOLC (ATP-dependent RNA helicase rhlB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOL6 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O6 GN=rhlB PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOL5 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOK1 (ATP-dependent RNA helicase rhlB OS=Escherichia coli O1:K1 / APEC GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOHS (ATP-dependent RNA helicase rhlB OS=Escherichia coli O9:H4 (strain HS) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECODH (ATP-dependent RNA helicase rhlB OS=Escherichia coli (strain K12 / DH10B) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECOBW (ATP-dependent RNA helicase rhlB OS=Escherichia coli (strain K12 / BW2952) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113
BLAST of FC876606 vs. ExPASy Swiss-Prot
Match: RHLB_ECO8A (ATP-dependent RNA helicase rhlB OS=Escherichia coli O8 (strain IAI1) GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 403 SRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASKKTGYGRAPSVLVLLPTKELAKQVHEDFDVYGGAVGL 717 S F + + E L+ KG + PIQA+ + L G D+ G+A+TG GKT+AF+ L + P A +K RA L++ PT+ELA Q+H D + A GL Sbjct: 12 SDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRA---LIMAPTRELAVQIHADAEPLAEATGL 113 The following BLAST results are available for this feature:
BLAST of FC876606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876606 ID=FC876606; Name=FC876606; organism=Citrus clementina; type=EST; length=728bpback to top |