FC876609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2 Query: 248 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT--QAAEQFKVPPPNTGNVASKPE--------------SSAMVQDDEE--VDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 640 KLG+K IPG+ RVT +K N ++ I KP+VF+S Y+VFGEAK+++ + +L Q A+ + P N PE ++A +DDEE VD + DIELV+ Q V +++A+KALKA +GD+V+AIM L+ Sbjct: 26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 239 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQ-----TQAAEQFKVPPPNTGNVASKPESSAMV-QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 640 AM KLG+ P+ + RVT+K+ + +L V+++P+V+ SP+ +TY+VFG+ +D++S+LQ + K P V ES +V Q + D GV PKD+E+VM + R + V+ L A D+VSA++ELT Sbjct: 19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETLIATKNDLVSAVLELT 158
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 54/144 (37.50%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 248 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT-------------QAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 640 KLG+K I G++RVT +K N +F I P+V++S + Y+VFGEAKI++ S +L + + ++ G+ ++KP ++A D+ VD + +DIELV +QA V +++A+KALK +GDIV+AIM L+ Sbjct: 26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKALKEHNGDIVNAIMALS 168
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 56/158 (35.44%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 248 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQ--AAEQFKVPPPNTGNV-------------ASKPESSAM-------------VQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMEL 637 KL ++ + G++RV +K+++ +FVI+ P+V+K+PT ++Y+VFGEA+ ED+ + + AA Q + TG+V ASK +S +D+ E D TG+E DI+LVM QA V R++A+ LK D D+V+ IM+L Sbjct: 39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNKAINGLKKNDSDVVNTIMDL 196
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 239 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQ----------------FKVPPPNT---------GNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMEL 637 A+ LG+K + G+ RVT+++++N+L V+S P+V+KSP SD YIVFGEAK+ED +S Q QA Q FK P + +S P S D + V ++I+L++ Q GV ++A +A + GD+++AIM+L Sbjct: 33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAKAREAYISEKGDLINAIMKL 190
BLAST of FC876609 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 248 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPESSAMVQD--------DEEVDETGVEPKDIELVMTQAGVPRSRAVKALKAADGDIVSAIMELT 640 KLG+K +PG+ RVT +K N +F I KP+VF+S Y+VFGEAK+++ + +L Q QA Q P ++ + +++A+ + +E+VD + DI+LV+ Q + +A+KALK +GDIV+AIM L+ Sbjct: 26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPE--DIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQAIKALKEHNGDIVNAIMSLS 164 The following BLAST results are available for this feature:
BLAST of FC876609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876609 ID=FC876609; Name=FC876609; organism=Citrus clementina; type=EST; length=709bpback to top |