FC876613

Overview
NameFC876613
Unique NameFC876613
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length888
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.710e-42
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query:   61 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWK-QNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKARENL-KMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIP 654
            + V LL  WAS + +R + AL  KGV YEY EENL N+SPLLL+ NP++KKIPVL+HNGKP+ ES +I++YIDE W  ++PL+P DPY+R+ ARFW  + D+K        + SKGEE E+  K   ++ K LE  L  KPF+G D  GF+D+ +     W    E      +   E  P L AW+   +E   +   +P
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLP 200          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.034e-42
Identity = 96/210 (45.71%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQN-PLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKA-RENLKMLERALEGKPFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLE 675
            M   +V LL +  S F +R++ AL LKG+ YE  EENL +KSPLLL  NPV+KKIP+L+HNGKP+ ESL I+EYIDE W +  PLLP DPY+R+ ARFWA + D K        ++ KGE+QE+A K   E  K LE  L  K +FGGD +GF+D+A+     W    E  A  S I+AE   L+  W  N +E   +   +P  H++ +
Sbjct:    1 MESNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFS-IEAECRKLV-VW-QNCMENERVSKSLPHPHKIYD 207          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32
Identity = 87/215 (40.47%), Postives = 121/215 (56.28%), Query Frame = 1
Query:   52 MAEES-VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNP-LLP-------EDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFF---GGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 657
            MAEE  + LL +W SPF  R + A+  KG+ +EY EE+L NKS LLLR NPV++KIPVL+H G+P++ESL+I++Y+D+A+   P LLP       +  Y RA ARFWA + D K        +  KGE Q  A +   E L+ LE  L  + FF   GG ++GF+D+A+     W    E   G S+   E  P L AW      +  +   +PS
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPS 213          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31
Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   52 MAEES-VKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLL--------PEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAK-ARENLKMLERALEGKPFF---GGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS 657
            MAEE  + LL +W SPF  R + A+  KG+ +EY EE+L NKS LLLR NPV++KIPVL+H G+P++ESL+I++Y+D+A+   P L         +  Y RA ARFWA + D K        +  KGE Q  A +   E L+ LE  L  + FF   GG ++GF+D+A+     W    E   G S+   E  P L AW      +  +   +PS
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPS 213          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 85/223 (38.12%), Postives = 123/223 (55.16%), Query Frame = 1
Query:   67 VKLLGYWASPFALRVKWALKLKGVHYEYVEENL-PNKSPLLLRYNPVYKKIPVLV-HNGKPLAESLLIIEYIDEAWKQNP-------LLPEDPYERANARFWAKFFDEKCVP--EVMGAFASKGEEQEKAAKARENLKMLERALE----GKPFF-GGDKI-GFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPSWHELLEHNK 684
            +++LG   SPF  R + AL L+GV YE ++E L P KS  LL  NPVY KIPVL+  +G+ + ES +I++YI++  +++        LLP+DPYERA  RFW  F D+K  P  + +    + G   + A   R  L +LE A +    G+ FF GGD   G LD+A+G      R  E + G+SLIDA   PLL  W   F   P  K  +P   ++++  +
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTR 223          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.195e-18
Identity = 67/215 (31.16%), Postives = 106/215 (49.30%), Query Frame = 1
Query:   58 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAA---KARENLKMLERALEGK--PFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPVIKACIPS---WHELLE 675
            E S+++      PFA R +  LK KG+ +E +  NL NK     + NP +  +PVL ++ G+ + ES +  EY+DEA+    LLP+DPYE+A  +   + F +  VP ++G+F     +++ A    + R+    LE  L  K   FFGG+ I  +D  + W   W   +E +     +D    P L  W+    E P + A + S   W   LE
Sbjct:   21 EGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSK--VPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLI-W--PWFERLEAMKLNECVD--HTPKLKLWMAAMKEDPTVSALLTSEKDWQGFLE 227          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 1
Query:   58 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAFASKGEEQEKAAKARENLK----MLERALEGK--PFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLEVPV 636
            E  +++      PFA R    LK KG+ +E +  NL NK       NP +  +PVL +  G  + ES++  EY+DEA+ +  L P+DPYE+A  +   + F +  VP ++ +F  + + +E     +E LK     LE A+  K   FFGG+ +  +D  + W   W + +E +     ID    P L  W+    E PV
Sbjct:   21 EGQIRVYSMRFCPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNP-FGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSK--VPSLVTSFI-RAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLI-W--PWFQRLEALELNECID--HTPKLKLWMATMQEDPV 211          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 1
Query:   58 EESVKLLGYWASPFALRVKWALKLKGVHYEYVEENLPNKSPLLLRYNPVYKKIPVLVHN-GKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVPEVMGAF--ASKGEEQEKAAKAREN-LKMLERALEG-KPFFGGDKIGFLD 510
            E  +++      PFA R    LK KG+ +E +  NL NK       NP+   +PVL ++ G  + ES++  EY+DEA+ +  L P+DPY++A  +   + F +  VP ++ +F  + + E+     +A EN  K LE  ++  K F GGD    +D
Sbjct:   21 EGQIRVYSMRFCPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPL-GLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSK--VPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVD 173          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: MAAI_DICDI (Maleylacetoacetate isomerase OS=Dictyostelium discoideum GN=mai PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 1
Query:   52 MAEESVKLLGYWASPFALRVKWALKLKGVHYEY-----VEENLPNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVP----EVMGAFAS-KGEEQEKAAKAR----ENLKMLERALE---GKPFFGGDKIGFLDIAV 519
            M E    L  YW S  + RV+ AL  K + YEY     +++    KS    + NP+ K IP L  +G  + +SL I+EY++E   +NPL+P+  YERA AR   +       P    +V+G  A   G++ +K+  AR         LE+ LE   GK F  GD + F D+ +
Sbjct:    1 MTENKTVLYSYWRSSCSWRVRVALAYKKIKYEYKAIHLLKDGGQQKSDEYSKLNPM-KAIPTLEIDGHIIGQSLAILEYLEETHPENPLMPKGSYERAIARQMMQIIGSDIQPLQNLKVLGLIAQYSGDDSKKSEWARTVITNGFNGLEKLLEKHSGK-FCVGDSVSFADLCL 171          
BLAST of FC876613 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 61/202 (30.20%), Postives = 101/202 (50.00%), Query Frame = 1
Query:   61 ESVKLLGYWASPFALRVKWALKLKGVHYEYVEENL---PNKSPLLLRYNPVYKKIPVLVHNGKPLAESLLIIEYIDEAWKQNPLLPEDPYERANARFWAKFFDEKCVP----EVMGAFASKGEEQEKAAKARENLK----MLERALEGK--PFFGGDKIGFLDIAVGWIGIWGRIVEEIAGVSLIDAETMPLLTAWLNNFLE 627
            + ++L  +  S  A RV+ AL LKG+ +EY   +L    + +P  L+ NP+   +PVLVH    +A+SL II Y++E + +NPLLP+D  +RA     A        P     V+     K    EK + A+ ++K     LE+ L+G    +  GD++G  D+ +       +I+  I G  + D    PLL +  + +L+
Sbjct:    7 QKMQLYSFSLSSCAWRVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPL-GYVPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRALNYQAANIVTSNIQPLQNLAVLNYIEEKLGSDEKLSWAKHHIKKGFSALEKLLKGHAGKYATGDEVGLADLFLA-----PQIIASITGFGM-DMAEFPLLKSLNDAYLK 201          
The following BLAST results are available for this feature:
BLAST of FC876613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
GSTX3_SOYBN4.710e-4243.50Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX1_NICPL8.034e-4245.71Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ9.844e-3240.47Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI2.193e-3139.53Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE5.402e-3038.12Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_HUMAN6.195e-1831.16Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT4.908e-1531.00Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_MOUSE1.209e-1332.05Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
MAAI_DICDI3.517e-1333.53Maleylacetoacetate isomerase OS=Dictyostelium disc... [more]
GSTZ1_DIACA5.079e-1230.20Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DD05RM1 EHR Citrus clementina cDNA clone KN0AAN2DD05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876613 ID=FC876613; Name=FC876613; organism=Citrus clementina; type=EST; length=888bp
GCACGAGGCATTTAGATATTATCACGCGCTGCTTTTGCTTGGCGAGCAAT
AATGGCTGAAGAAAGTGTGAAGTTGCTGGGTTACTGGGCAAGCCCCTTTG
CTCTTAGAGTTAAGTGGGCGCTCAAACTGAAGGGAGTTCACTACGAATAT
GTTGAAGAGAATCTCCCCAACAAGAGTCCCTTGCTGTTGCGATACAATCC
GGTTTATAAGAAGATTCCAGTTCTTGTACACAATGGGAAACCATTGGCAG
AATCACTACTGATCATCGAATACATTGATGAAGCGTGGAAACAAAATCCT
CTCCTCCCAGAAGATCCTTACGAACGGGCCAATGCACGTTTCTGGGCAAA
ATTCTTTGATGAGAAGTGTGTACCTGAAGTCATGGGAGCATTTGCCTCAA
AAGGGGAGGAACAAGAGAAAGCTGCAAAAGCTCGAGAGAATCTGAAGATG
CTGGAAAGGGCTCTGGAGGGGAAGCCCTTTTTTGGTGGTGACAAGATAGG
CTTTCTGGACATTGCTGTGGGGTGGATTGGAATCTGGGGTCGAATTGTTG
AGGAAATTGCAGGTGTCAGCCTGATTGATGCAGAGACGATGCCTTTGCTT
ACTGCTTGGTTGAACAATTTTCTTGAAGTTCCTGTTATCAAAGCATGCAT
ACCATCTTGGCACGAATTGCTTGAGCACAATAAAGGCTTCCGCAAGATCT
TGACAGGTTCATCAACTTGAAGTCTCTACCATCATCAGCGGTTGCCCATG
CATGAAGGTTTCTTAATATGATTTATAAATACTGCTTTTAGACTAAATAT
TATCATAAATAAGGCATGATCCTTCATAGGTTTGTATGAATGTCTTCTAG
ACTATATATATATCATATATGGTACATTATTGGTAACT
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