FC876621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876621 vs. ExPASy Swiss-Prot
Match: TRM61_CANGA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida glabrata GN=TRM61 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19 Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = 2 Query: 149 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMV-----FGNKGGFVYLLAPTPELWTLVLSHTSQILYIAYITFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVSPTRHVYTYDFHDQRAASAKEDFE 565 I+EGDL +++ D +K V + N F R+G+F H D IGKP+GS + K FV+++ P+PELWTL L H +QI+Y ++++ L P V AR+V +Y+Y+FH R A E+F+ Sbjct: 12 IQEGDLALIWISRDNIKPVTINANETFNTRYGSFPHKDMIGKPYGSQIAIRTKVAKKFAFVHVMQPSPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPNSRVIEAGTGSGSFSHAFARSVG---QLYSYEFHPVRYEQATEEFK 152
BLAST of FC876621 vs. ExPASy Swiss-Prot
Match: TRM61_YARLI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica GN=TRM61 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18 Identity = 51/150 (34.00%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 149 IKEGDLVIVYERHDCMKAVKVCQNSA-FQNRFGAFKHS--DWIGKPFGSMVFGNKGGFVYLLAPTPELWTLVLSHTSQILYIAYITFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVSPTRHVYTYDFHDQRAASAKEDFERTRMSTFV 589 I++GDLV+ + +K + V + F R+GAF H D G GSM +K GF++L+ PTPELWTL L H +QI+Y ++++ L++ PG V +R+ VY+Y+FH++R AK++FER +++ + Sbjct: 9 IEDGDLVLGWMTRTAIKPIVVEKKEGLFNTRYGAFPHRNMDKYGAQLGSM---SKQGFIHLIHPTPELWTLSLPHRTQIVYTTDSSYIVQRLKIRPGSTVIESGTGSGSFTHAISRSAGLAGKVYSYEFHEERYNLAKQEFERHQLTNVI 155
BLAST of FC876621 vs. ExPASy Swiss-Prot
Match: TRM61_SCHPO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe GN=cpd1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.515e-18 Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 149 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFGN-KGGFVYLLAPTPELWTLVLSHTSQILYIAYITFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVSPTRHVYTYDFHDQRAASAKEDFERTRM 577 ++ GDL + + + + + + F N++GAF HS+ IGK +G + K GF+YLL PTPELWTL L H +QI+Y I + L + G V +R V P ++T+++H R +A ++F M Sbjct: 10 VENGDLAVAWIGRNKLIPLHIEAEKTFHNQYGAFPHSEMIGKRYGEQIASTAKQGFIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEYHATRYQTALQEFREHEM 153
BLAST of FC876621 vs. ExPASy Swiss-Prot
Match: TRM61_ASHGO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii GN=TRM61 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.575e-17 Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 149 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMV-----FGNKGGFVYLLAPTPELWTLVLSHTSQILYIAYITFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVSPTRHVYTYDFHDQRAASAKEDFE 565 I EGDLV+V+ +K +++ F R+G+F H D +G+P+GS + N+ GF+++L PTPELWTL L H +QI+Y ++++ L P V AR V +++Y+FH R A +F+ Sbjct: 11 IAEGDLVLVWISRGNVKQLRIKSGEVFNTRYGSFAHDDIVGRPYGSQIGVRTKGSNRFGFIHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLGCSPQSRVIEAGTGSGSFSHAFARTVG---QLFSYEFHHMRYEQALAEFQ 151 The following BLAST results are available for this feature:
BLAST of FC876621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876621 ID=FC876621; Name=FC876621; organism=Citrus clementina; type=EST; length=611bpback to top |