FC876624

Overview
NameFC876624
Unique NameFC876624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOCOS_ORYSJ (Molybdenum cofactor sulfurase OS=Oryza sativa subsp. japonica GN=MCSU3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11
Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = 3 
Query:  117 MLLSQGSLDALNKLL---------KEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAGPEPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGN----GKVLKLGDPVF 494
            +L+S+ S+  LN  L         K PV   RFRPN+++ G  P+SED W ++RI +  F  +  C+RC++  ++QD+G       + LK       L   R+++GKI FG  +  +D +   N    G+ L++G  V+
Sbjct:  689 LLISEESISDLNSRLNSGKGDCKQKLPVDAMRFRPNLVISGSSPYSEDNWKKLRIGEACFTSMGGCNRCQMINLHQDSG-------QVLKSKEPLATLASYRRKKGKILFGILLNYEDIMEGENETIAGRWLQVGQQVY 820
The following BLAST results are available for this feature:
BLAST of FC876624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MOCOS_ORYSJ1.134e-1131.65Molybdenum cofactor sulfurase OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DE02RM1 EHR Citrus clementina cDNA clone KN0AAN2DE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876624 ID=FC876624; Name=FC876624; organism=Citrus clementina; type=EST; length=651bp
GCACGAGGGGGAAATCTAGTCGGCTAGTCCGTTATAATGCAGAATCAGAA
ACTAGACCTGTGGATCCTGAATATGCTGCTGGACAGATAACAATGTTTTC
TGATGGGTATCCATTTATGTTGTTGTCTCAGGGATCTTTGGACGCACTAA
ATAAGCTTCTCAAGGAGCCTGTTCCAATTAACCGTTTTCGGCCCAACATC
CTTGTTGATGGTTGTGAACCGTTTTCTGAGGACACATGGACCGAGGTCCG
AATAAACAAGTTCACGTTTCAAGGTGTTAAGCTGTGCTCCCGCTGTAAGA
TTCCAACAATCAATCAAGACACTGGCGATGCCGGTCCTGAACCAAATGAG
ACTCTAAAGCAGATTAGATCAGATAAAGTTTTGCGTCCAGGTCGAAAACA
GCGGGGAAAGATATACTTTGGGCAGAACATGGTGTGCAAGGATAACCTTA
CTGAAGGAAACGGAAAGGTGCTTAAACTTGGGGATCCTGTTTTTGTTCTG
AAGAAGGTCACTTCTGCAGCTGAAGCAGCAGCTTGAACTCTACAGAATAT
TTGTTGGGGCAATAAATAAAACTCTGTTGTGTATCAAAGTCTAATGCAAT
AAGAAACCGCTTGCTTGCTAGACCATGGCAAGGTTCGGTTTTAANAAAAA
A
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