FC876627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_ALIAC (Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.598e-18 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 616 +TDA +Q + PVLV+FWA WCGPCRM+ P+++E ++ + K+ K+N DE+P +++GI SIPT+++FK G +IG PK L + L Sbjct: 5 LTDANFQQAI-QGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_LISMO (Thioredoxin OS=Listeria monocytogenes GN=trxA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.074e-18 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 616 V +TDAT++ S VL +FWA WCGPCRM+ P+++E+ ++ LK K++ DE+P +G+ SIPT++I K+GE +T+IG PK L I K++ Sbjct: 2 VKEITDATFEQET--SEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_LISIN (Thioredoxin OS=Listeria innocua GN=trxA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.074e-18 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 305 VPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 616 V +TDAT++ S VL +FWA WCGPCRM+ P+++E+ ++ LK K++ DE+P +G+ SIPT++I K+GE +T+IG PK L I K++ Sbjct: 2 VKEITDATFEQET--SEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV 103
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.353e-17 Identity = 38/93 (40.86%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.353e-17 Identity = 38/93 (40.86%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: TRXB_MYCLE (Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium leprae GN=trxB/A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.308e-17 Identity = 37/93 (39.78%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 592 VTDA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + +L K++ D +P +A + + SIPT+++F+ G+ ++GA K+ L Sbjct: 354 VTDASFFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAREFQVVSIPTMILFQGGQPVKRIVGAKGKAAL 446
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_BUCAP (Thioredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trxA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.954e-16 Identity = 37/99 (37.37%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 314 VTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 610 +TD ++ VL+ S VLV+FWA WC PC+++ PI++E++++Y K+K K+N +++P+ A Y IR IP +++F E T +GA+ K L +++ Sbjct: 7 LTDQNFEKEVLEHKSFVLVDFWAEWCNPCKILAPILEEIAQEYFNKIKVGKLNIEKNPNTAPIYSIRGIPALLLFHGREVLATKVGAISKLQLKDFLDE 105
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO1_CHLTE (Thioredoxin-1 OS=Chlorobium tepidum GN=trx1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.333e-16 Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 2 Query: 326 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 610 T L+ S PV ++FWA WCGPC+M+ P + +L+ ++ G+L KVN D+ P A R+ ++ IP +M+F G+ K GA+P + + K Sbjct: 4 TLDDLIRTSELPVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQQPDAAARFQVQGIPALMLFVGGQLKWRTAGAIPYQQMRQEVLK 98
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_MYCSM (Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.425e-16 Identity = 40/104 (38.46%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 311 AVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYK--VNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 616 AVTD ++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + +L K V+ D +P+ A + + SIPT+++FK+G ++GA K+ L + L Sbjct: 9 AVTDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPATARDFQVVSIPTMILFKDGAPVKRIVGAKGKAALLRELSDAL 112
BLAST of FC876627 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.160e-15 Identity = 33/89 (37.08%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 344 LDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 610 +++ V+V+FWAPWCG C+M+ P+++E+ + + K+N D+ +A + + SIPT+++FK+G++ D IG V KS + T I+K Sbjct: 15 IETNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQK 103 The following BLAST results are available for this feature:
BLAST of FC876627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876627 ID=FC876627; Name=FC876627; organism=Citrus clementina; type=EST; length=745bpback to top |