FC876630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MSBA_THIDA (Lipid A export ATP-binding/permease protein msbA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=msbA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29 Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 3 Query: 9 IFSTTIRENIIY-ARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRL 452 +F+ T+ NI Y ++ AS E++ A A+A FI ++P G DT +G G+ L+ GQ+QRIAIAR +LKNAPIL+LD R VQ AL+TL M N+TT++IAHR + + + IVVL GGRIVE G H LLAK G Y +L Sbjct: 425 LFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSGGQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETL-MQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHADLLAKQGRYAQL 572
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MSBA_METFK (Lipid A export ATP-binding/permease protein msbA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=msbA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29 Identity = 72/154 (46.75%), Postives = 100/154 (64.94%), Query Frame = 3 Query: 9 IFSTTIRENIIYA-RHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHY 467 +F+ T+ NI Y NASE +V AA+ A+A FI LP+G + +G RGV L+ GQ+QR+AIAR +LKNAPILLLD R VQ ALD L M N+T+I+IAHR + + + D I+V+ GRI+E G+H+ LLA +G Y +L + + Sbjct: 430 LFNDTVFNNIAYGVLRNASEEDVIAAAKAAHAWDFIQQLPNGLQSEIGDRGVRLSGGQRQRLAIARAILKNAPILLLDEATSALDTESERHVQAALDEL-MQNRTSIVIAHRLSTIENADRIMVMEQGRIIEGGSHEELLALDGHYAKLYRKQF 582
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MSBA_NEIG1 (Lipid A export ATP-binding/permease protein msbA OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=msbA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.532e-29 Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRL 452 +F T+ EN+ Y+R +A EAEV A + AN I + P G +G G +L+ GQ+QR+AIAR +LK+APILLLD R+VQ+AL+ L M N+T I++AHR + D I+V++GG+I+E+GTHD L+ +NG Y L Sbjct: 462 LFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIGSNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERL-MENRTGIIVAHRLTTVESADRIIVMDGGKIIEQGTHDQLMFQNGYYTML 608
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: ABCB8_XENTR (ATP-binding cassette sub-family B member 8, mitochondrial OS=Xenopus tropicalis GN=abcb8 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.532e-29 Identity = 73/150 (48.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQ 458 +F TTI ENI + R +A++AEV EAA ANA FI S P GY+T +G RGV L+ GQKQR+AIAR +LK+ IL+LD R VQ ALD G +T ++IAHR + + D IVVL+ G++ E GTH LL + GLY L++ Sbjct: 530 LFGTTIIENIRFGRPDATDAEVHEAAIQANADSFIRSFPEGYNTMLGERGVTLSGGQKQRVAIARALLKDPKILILDEATSALDTESERAVQVALDRARSG-RTVLVIAHRLSTISEADFIVVLSKGQVAEFGTHQDLLRRGGLYADLIR 678
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29 Identity = 73/153 (47.71%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEA---EVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAK-NGLYVRLM 455 +FS ++ ENI Y N S +V+ AA +ANA FI S P G+DT VG +G+ L+ GQKQRIAIAR +LKN ILLLD +VQEALD L+ G +T ++IAHR + +++ + + VL+ G+I E GTH+ LL K NGLY +LM Sbjct: 544 LFSCSVAENIAYGADNLSSVTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQEALDRLMEG-RTVLIIAHRLSTIKNANFVAVLDHGKICEHGTHEELLLKPNGLYRKLM 695
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: Y015_MYCGE (Putative ABC transporter ATP-binding protein MG015 OS=Mycoplasma genitalium GN=MG015 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.319e-29 Identity = 63/150 (42.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQ 458 +FS TI+ENI R +A++ E+ A + ANAH FI LP GYDT++ + L+ G++Q + IAR V++NAP+LLLD +++QE++ L M NKT+ +I+HR +++R I+V+N G+++E G HD L+ +NG Y RL Q Sbjct: 437 LFSGTIKENIRLGRQDATDDEIIAACKTANAHDFIMRLPKGYDTYISNKADYLSVGERQLLTIARAVIRNAPVLLLDEATSSVDVHSEKLIQESIGRL-MKNKTSFIISHRLSIIRDATLIMVINDGKVLEMGNHDQLMKQNGFYARLKQ 585
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: AB28B_ARATH (ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.319e-29 Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHN--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLM 455 +FS ++ ENI Y N S+ ++ +AA+ ANAH FI SLP GYDT VG RG L+ GQ+QR+AIAR +LKNAPIL+LD R+VQ AL+ L M ++TT++IAHR + ++ + I V + G+I+E GTH L+A+ G Y L+ Sbjct: 557 LFSLSVAENIAYGLPNEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRL-MKDRTTLVIAHRLSTVQSANQIAVCSDGKIIELGTHSELVAQKGSYASLV 706
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MSBA_ERWCT (Lipid A export ATP-binding/permease protein msbA OS=Erwinia carotovora subsp. atroseptica GN=msbA PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.366e-29 Identity = 68/156 (43.59%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 9 IFSTTIRENIIYARH-NASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYGK 473 +F+ TI NI YAR+ N S E++ AA++A A FI+ + HG DT +G GV L+ GQ+QRIAIAR +L+++PIL+LD R +Q ALD L ++T ++IAHR + + D I+V+ GRI+E G H +LLA NG Y +L + +G+ Sbjct: 428 LFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDEL-QKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATNGAYAQLHRMQFGE 582
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MDR3_HUMAN (Multidrug resistance protein 3 OS=Homo sapiens GN=ABCB4 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 7.366e-29 Identity = 71/149 (47.65%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLM 455 +FSTTI ENI Y R N + E+K+A + ANA+ FI LP +DT VG RG L+ GQKQRIAIAR +++N ILLLD VQ ALD G +TTI+IAHR + +R+ D I G IVE+G+H L+ K G+Y +L+ Sbjct: 481 LFSTTIAENICYGRGNVTMDEIKKAVKEANAYEFIMKLPQKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREG-RTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELMKKEGVYFKLV 628 HSP 2 Score: 124.405 bits (311), Expect = 4.775e-28 Identity = 69/156 (44.23%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHN--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 470 +F +I ENI Y ++ S+ E+ AA+ AN H FI +LPH Y+T VG +G L+ GQKQRIAIAR +++ ILLLD +VVQEALD G +T I+IAHR + +++ D IVV GR+ E GTH LLA+ G+Y ++ G Sbjct: 1128 LFDCSIAENIAYGDNSRVVSQDEIVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEALDKAREG-RTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQAG 1282
BLAST of FC876630 vs. ExPASy Swiss-Prot
Match: MDR2_RAT (Multidrug resistance protein 2 OS=Rattus norvegicus GN=Abcb4 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.366e-29 Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHNASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLM 455 +FSTTI ENI Y R N + E+K+A + ANA+ FI LP +DT VG RG L+ GQKQRIAIAR +++N ILLLD VQ ALD G +TTI+IAHR + +R+ D I G IVE+G+H L+ K G+Y RL+ Sbjct: 478 LFSTTIAENIRYGRGNVTMDEIKKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREG-RTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELIKKEGIYFRLV 625 HSP 2 Score: 117.857 bits (294), Expect = 4.469e-26 Identity = 65/156 (41.67%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 9 IFSTTIRENIIYARHN--ASEAEVKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDXXXXXXXXXXXRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLLAKNGLYVRLMQPHYG 470 +F +I +NI Y ++ S+ E+ AA+ AN H FI +LP Y+T VG +G L+ GQKQRIAIAR +++ +LLLD +VVQEALD G +T I+IAHR + +++ D IVV++ G++ E GTH LLA+ G+Y ++ G Sbjct: 1120 LFDCSIAKNIAYGDNSRVVSQDEIVRAAKEANIHPFIETLPQKYETRVGDKGTQLSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEALDKAREG-RTCIVIAHRLSTIQNADLIVVIDNGKVKEHGTHQQLLAQKGIYFSMVNIQAG 1274 The following BLAST results are available for this feature:
BLAST of FC876630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876630 ID=FC876630; Name=FC876630; organism=Citrus clementina; type=EST; length=634bpback to top |