FC876640

Overview
NameFC876640
Unique NameFC876640
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length777
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.370e-92
Identity = 152/256 (59.38%), Postives = 196/256 (76.56%), Query Frame = 1
Query:   13 KKEVIWSMMGGQTTEQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ-HPHFD 768
            +KEVIWSM G Q  EQGDCS  K   N+PH CKK PTVVDLLPG P + QIANCCK G +S+++QDP  + +SFQ+ VG +G +N+TVRVPKNF+L APGPGYTC  A + KP++F++ D RR TQ +MTWNV CTYSQFLAQK P+CCVSLSSF N+  V CPTC+CGC+N  + +G C+    P L S+++ PG+   +P++QCTSHMCP++++WH+ L  KE++RVKIT+TN NY MN++ WNLVVQ HP  D
Sbjct:   79 QKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILD 334          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.091e-73
Identity = 127/256 (49.61%), Postives = 169/256 (66.02%), Query Frame = 1
Query:   16 KEVIWSMMGGQTTEQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPHFDNL 774
            +EVIW M G +TTEQG+CS +   GN+PHCC + PT+VDLLPG   N Q+ANCC+GGV++S +QD    +S+F ++VG++    +   +P NF +  PG  Y+C  A    PTKF T   RR TQA+ TW   C YSQF +  +P CCVSLS+FY + IV CPTC+CGC      S  C+   + P      + P +   P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN   NY+ WNLVV HP+  ++
Sbjct:   88 QEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSV 336          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.129e-69
Identity = 127/265 (47.92%), Postives = 167/265 (63.02%), Query Frame = 1
Query:    4 RGAKKEVIWSMMGGQTTEQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTT-----NKTVRVPKNFTLKAPGPGYTCGPA-KVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPHFDNLT 777
            R A  E+IW M G + TEQGDC + +G   PHCC+K P +VDL PGTPYN Q+++CC+GGV+SS  Q+  T+ ++FQ+ VG          ++   +P  F +  PG  Y+C  A KV   +       R      +TW VTCTYSQF+   +PTCCVSLSSFYN TIV CP C+CGC  + T        + P L +     G+   P+ +CT HMCP+RVHWHVK++Y+EYWRVK+TITN+N   NYS WNLVVQHP+  +LT
Sbjct:   70 RWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRARAPCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLT 329          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.390e-44
Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 1
Query:    4 RGAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTY 417
            RG KKEVIW+M+G +TT QG CS +KGNIP  C + PTVVDLLPGTP+NQQIANCCK GV+   ++      S+FQLSVG+AG + KT R+P NF   AP   Y CGP+K  +PT+F T+DKRR+T A+MTWN+TC +
Sbjct:   69 RGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20
Identity = 66/228 (28.95%), Postives = 105/228 (46.05%), Query Frame = 1
Query:  100 CKKDPTVVDLLPGTPYNQQ----IANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711
            C + PTV+DL P T YN      I  CC+ G I   + DP+ + S FQ+ V           +  P+N+ +     P Y CGP     P++F+  S       A  +W V C  +Q     +P CCVS S+++N++IV C TCACGC +N         + S + P+   L    N             +P    + C  + C + ++WH+  +Y+  W  ++T+ N+
Sbjct:  299 CARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNW 523          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20
Identity = 63/239 (26.36%), Postives = 104/239 (43.51%), Query Frame = 1
Query:  100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSVGAAGT--TNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFITSDKRRVTQAMM-TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ 753
            C++ P ++DL P    +  + N   CC+ G I     DP+ ++S F + V           +  P+N+ +K    P Y+CGP     PT +         ++   +W + C  +Q   +  P CCVS S+F+N++I+ C TCACGC +    + S   P                  L    N       P        C + ++WH+  +Y+  W V+ITI N+   +++  W L VQ
Sbjct:  298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTE-IPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQ 534          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19
Identity = 70/227 (30.84%), Postives = 100/227 (44.05%), Query Frame = 1
Query:  100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVPKNFTLKAPG---PGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711
            C++ P + DL P    +        CCK G +     DP+ + S FQL V       N+T   P     K  G   P Y CGP     P++F   S    VT A+ +W V C  ++  AQ +  CCVS S+FYN + V C TCACGC +  T+     S   + P    L    N   K          P    + C  + C + ++WHV  +YK  W  ++T+ N+
Sbjct:  311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHW-KIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNW 534          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17
Identity = 69/269 (25.65%), Postives = 120/269 (44.61%), Query Frame = 1
Query:   13 KKEVIWSMMGG--QTTEQGDC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQ----QIANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFI-TSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711
            K E ++S  G      +  DC     +KY  ++       C + P ++DL P T YN     +I  CC+ G I   + DP  + S FQ+ V          ++  P+++ +K    P Y CGP      ++F  TS       A  +W V C  +Q      P CCVS SS++N++++ C TCACG  ++   + +C         P+ A ++    +           NR +   + C  + C + ++WH+  +Y+  W  ++T+ N+
Sbjct:  252 KDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNW 515          
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 65/230 (28.26%), Postives = 102/230 (44.35%), Query Frame = 1
Query:  100 CKKDPTVVDLLPGTPYNQQIAN----CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVP-KNFTLKA-PGPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711
            C+K P + DL P    +  +      CCK G +     DP+ + + FQL V       N+T   P +N+ +     P Y CGP      T F   S  +  T A+ +W V C  ++   Q    CCVS S+FYN++ + C TCACGC++  T++    N     L    +T   P  NR +                + C  + C I ++WH+  +Y   W  ++T+ N+
Sbjct:  301 CQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFNW 524          
The following BLAST results are available for this feature:
BLAST of FC876640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
COBL4_ORYSJ1.370e-9259.38COBRA-like protein 4 OS=Oryza sativa subsp. japoni... [more]
COBL6_ARATH1.091e-7349.61COBRA-like protein 6 OS=Arabidopsis thaliana GN=CO... [more]
COBL7_ORYSJ2.129e-6947.92COBRA-like protein 7 OS=Oryza sativa subsp. japoni... [more]
COBL5_ARATH1.390e-4459.42COBRA-like protein 5 OS=Arabidopsis thaliana GN=CO... [more]
COBL7_ARATH1.071e-2028.95COBRA-like protein 7 OS=Arabidopsis thaliana GN=CO... [more]
COBL9_ARATH4.071e-2026.36COBRA-like protein 9 OS=Arabidopsis thaliana GN=CO... [more]
CBL10_ARATH2.020e-1930.84COBRA-like protein 10 OS=Arabidopsis thaliana GN=C... [more]
COBL8_ARATH4.213e-1725.65COBRA-like protein 8 OS=Arabidopsis thaliana GN=CO... [more]
CBL11_ARATH1.038e-1528.26COBRA-like protein 11 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DF03RM1 EHR Citrus clementina cDNA clone KN0AAN2DF03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876640 ID=FC876640; Name=FC876640; organism=Citrus clementina; type=EST; length=777bp
GCACGAGGGGCAAAAAAGGAAGTCATCTGGAGCATGATGGGAGGACAAAC
CACAGAGCAAGGAGATTGTTCAAAATATAAAGGGAACATCCCACATTGCT
GCAAGAAGGATCCAACAGTTGTAGATTTGTTGCCGGGGACTCCATATAAC
CAGCAGATTGCAAATTGTTGCAAAGGGGGAGTAATAAGCTCCTGGGCACA
GGACCCAACTACTGCATTAAGCTCATTCCAGCTCAGTGTTGGTGCTGCAG
GAACAACTAACAAAACTGTCAGAGTACCCAAAAATTTCACACTTAAAGCC
CCAGGGCCTGGATATACTTGTGGACCTGCAAAAGTTGGTAAACCAACTAA
ATTCATTACGTCAGATAAGAGGAGAGTCACACAAGCTATGATGACCTGGA
ATGTCACATGCACATATTCACAGTTCTTGGCTCAAAAGACACCCACCTGT
TGTGTTTCTCTCTCTTCCTTCTACAATGAAACAATAGTAAGCTGCCCAAC
GTGTGCTTGTGGCTGTCAAAACAATGGAACGGAATCTGGGAGTTGCATAA
ATCCAAAGACTCCACATTTGGCATCAGTTGTGAATACTCCAGGAAAACCC
AACAGACCAATGGTTCAGTGTACCAGCCATATGTGTCCCATCCGAGTTCA
TTGGCATGTCAAGCTCAATTATAAGGAGTACTGGCGTGTGAAGATCACAA
TCACTAATTTTAATTACGCAATGAATTACTCACTGTGGAATCTAGTCGTG
CAACACCCCCACTTTGATAATCTCACA
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