FC876640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.370e-92 Identity = 152/256 (59.38%), Postives = 196/256 (76.56%), Query Frame = 1 Query: 13 KKEVIWSMMGGQTTEQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ-HPHFD 768 +KEVIWSM G Q EQGDCS K N+PH CKK PTVVDLLPG P + QIANCCK G +S+++QDP + +SFQ+ VG +G +N+TVRVPKNF+L APGPGYTC A + KP++F++ D RR TQ +MTWNV CTYSQFLAQK P+CCVSLSSF N+ V CPTC+CGC+N + +G C+ P L S+++ PG+ +P++QCTSHMCP++++WH+ L KE++RVKIT+TN NY MN++ WNLVVQ HP D Sbjct: 79 QKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILD 334
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.091e-73 Identity = 127/256 (49.61%), Postives = 169/256 (66.02%), Query Frame = 1 Query: 16 KEVIWSMMGGQTTEQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPHFDNL 774 +EVIW M G +TTEQG+CS + GN+PHCC + PT+VDLLPG N Q+ANCC+GGV++S +QD +S+F ++VG++ + +P NF + PG Y+C A PTKF T RR TQA+ TW C YSQF + +P CCVSLS+FY + IV CPTC+CGC S C+ + P + P + P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN NY+ WNLVV HP+ ++ Sbjct: 88 QEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSV 336
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 2.129e-69 Identity = 127/265 (47.92%), Postives = 167/265 (63.02%), Query Frame = 1 Query: 4 RGAKKEVIWSMMGGQTTEQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTT-----NKTVRVPKNFTLKAPGPGYTCGPA-KVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPHFDNLT 777 R A E+IW M G + TEQGDC + +G PHCC+K P +VDL PGTPYN Q+++CC+GGV+SS Q+ T+ ++FQ+ VG ++ +P F + PG Y+C A KV + R +TW VTCTYSQF+ +PTCCVSLSSFYN TIV CP C+CGC + T + P L + G+ P+ +CT HMCP+RVHWHVK++Y+EYWRVK+TITN+N NYS WNLVVQHP+ +LT Sbjct: 70 RWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRARAPCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLT 329
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.390e-44 Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 4 RGAKKEVIWSMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTY 417 RG KKEVIW+M+G +TT QG CS +KGNIP C + PTVVDLLPGTP+NQQIANCCK GV+ ++ S+FQLSVG+AG + KT R+P NF AP Y CGP+K +PT+F T+DKRR+T A+MTWN+TC + Sbjct: 69 RGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20 Identity = 66/228 (28.95%), Postives = 105/228 (46.05%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQ----IANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711 C + PTV+DL P T YN I CC+ G I + DP+ + S FQ+ V + P+N+ + P Y CGP P++F+ S A +W V C +Q +P CCVS S+++N++IV C TCACGC +N + S + P+ L N +P + C + C + ++WH+ +Y+ W ++T+ N+ Sbjct: 299 CARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNW 523
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20 Identity = 63/239 (26.36%), Postives = 104/239 (43.51%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSVGAAGT--TNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFITSDKRRVTQAMM-TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ 753 C++ P ++DL P + + N CC+ G I DP+ ++S F + V + P+N+ +K P Y+CGP PT + ++ +W + C +Q + P CCVS S+F+N++I+ C TCACGC + + S P L N P C + ++WH+ +Y+ W V+ITI N+ +++ W L VQ Sbjct: 298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTE-IPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQ 534
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19 Identity = 70/227 (30.84%), Postives = 100/227 (44.05%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVPKNFTLKAPG---PGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711 C++ P + DL P + CCK G + DP+ + S FQL V N+T P K G P Y CGP P++F S VT A+ +W V C ++ AQ + CCVS S+FYN + V C TCACGC + T+ S + P L N K P + C + C + ++WHV +YK W ++T+ N+ Sbjct: 311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHW-KIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNW 534
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 69/269 (25.65%), Postives = 120/269 (44.61%), Query Frame = 1 Query: 13 KKEVIWSMMGG--QTTEQGDC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQ----QIANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFI-TSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711 K E ++S G + DC +KY ++ C + P ++DL P T YN +I CC+ G I + DP + S FQ+ V ++ P+++ +K P Y CGP ++F TS A +W V C +Q P CCVS SS++N++++ C TCACG ++ + +C P+ A ++ + NR + + C + C + ++WH+ +Y+ W ++T+ N+ Sbjct: 252 KDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNW 515
BLAST of FC876640 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15 Identity = 65/230 (28.26%), Postives = 102/230 (44.35%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN----CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVP-KNFTLKA-PGPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 711 C+K P + DL P + + CCK G + DP+ + + FQL V N+T P +N+ + P Y CGP T F S + T A+ +W V C ++ Q CCVS S+FYN++ + C TCACGC++ T++ N L +T P NR + + C + C I ++WH+ +Y W ++T+ N+ Sbjct: 301 CQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFNW 524 The following BLAST results are available for this feature:
BLAST of FC876640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876640 ID=FC876640; Name=FC876640; organism=Citrus clementina; type=EST; length=777bpback to top |