FC876687
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.253e-31 Identity = 72/214 (33.64%), Postives = 118/214 (55.14%), Query Frame = 2 Query: 74 LIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENI-EKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMKXXXXXXXXXXXXXXXXXXXXCHGFK 712 +IYS VARG+ +LAE+T GNF +I + L +P + K +Y + + F+YLV + TY +A E GR+IP FL+ VK F Y G K TA+A +N +F L+ M + + + +++ A++ EVK +++ +I ++L RGEKIE+LV++T+ L Q+ F++Q ++ MW +N+K C GF+ Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLIIIFIIVMSYCDGFR 214
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31 Identity = 67/189 (35.45%), Postives = 114/189 (60.32%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + ++ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31 Identity = 68/189 (35.98%), Postives = 115/189 (60.85%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R +FL VK+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.473e-31 Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L ++Y H E ++A+ +AQV E+KG+M+ NI+ V RGEK+ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.237e-30 Identity = 73/213 (34.27%), Postives = 121/213 (56.81%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKF-TYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMKXXXXXXXXXXXXXXXXXXXXCHG 706 S++Y+ VARGTV+LAE + + N ++IA Q L+K+P + +Y+ D + F+ +G T +A E AGR+IP +FLE + + F + YG +A A ++N EF L + ++Y + P ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N++ FR+Q +W +N K CHG Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 3.600e-30 Identity = 67/189 (35.45%), Postives = 114/189 (60.32%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.600e-30 Identity = 67/189 (35.45%), Postives = 114/189 (60.32%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY+ + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 8.019e-30 Identity = 67/189 (35.45%), Postives = 113/189 (59.79%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 +++++ VARGT ILA++ GNF + Q L K+P+ NNK TY + F+Y+ ++ Y + + R FL +K+ F Y G +A TA+ ++N EF S L +++ ++ + + K+ + +AQV E+KG+M+ NI+ V RGE++ELL+DKTENL + F+ N+ R M ++N+K Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLK 188
BLAST of FC876687 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26 Identity = 68/193 (35.23%), Postives = 109/193 (56.48%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTNMRRKMWIQNMK 637 M Q ++Y+ V+ V L E+ GNF +A + + K+P T+ K Y + H F+Y+ EN + + E G QIP FL +++ F + YG + + + + F L+E M+Y +P+ +K+ V QVSE KG + + IEK + RGEKIE++VDKTE L+S++ F+ ++RK+W QN K Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKK 189 The following BLAST results are available for this feature:
BLAST of FC876687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876687 ID=FC876687; Name=FC876687; organism=Citrus clementina; type=EST; length=814bpback to top |