FC876691

Overview
NameFC876691
Unique NameFC876691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_CANGA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida glabrata GN=TRM61 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23
Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMV-----FSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGV-RDIQGQGF 624
            I+EGDL +++   D +K V +  N  F  R+G+F H D IGKP+GS +      + K  FV+++ P+PELWTL L HRTQI+Y  D S+++  L   P   V              AR+V   G +Y+++FH  R   A E+F+  G+    T+   RD+   GF
Sbjct:   12 IQEGDLALIWISRDNIKPVTINANETFNTRYGSFPHKDMIGKPYGSQIAIRTKVAKKFAFVHVMQPSPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPNSRVIEAGTGSGSFSHAFARSV---GQLYSYEFHPVRYEQATEEFKEHGLLDKNTIITHRDVCKDGF 173          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_ASHGO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii GN=TRM61 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.346e-22
Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGV--SSFVTVGVRDIQGQGF 624
            I EGDLV+V+     +K +++     F  R+G+F H D +G+P+GS +      SN+ GF+++L PTPELWTL L HRTQI+Y  D S+++  L   P   V              AR V   G +++++FH  R   A  +F+  G+     VT+  RD+  +GF
Sbjct:   11 IAEGDLVLVWISRGNVKQLRIKSGEVFNTRYGSFAHDDIVGRPYGSQIGVRTKGSNRFGFIHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLGCSPQSRVIEAGTGSGSFSHAFARTV---GQLFSYEFHHMRYEQALAEFQEHGLIADGNVTITHRDVCQKGF 173          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_SCHPO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe GN=cpd1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.113e-22
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSAFQNRFGAFKHSDWIGKPFGSMVFSN-KGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFER----TGVSSFVTVGVRDIQGQGFPD 630
            ++ GDL + +   + +  + +     F N++GAF HS+ IGK +G  + S  K GF+YLL PTPELWTL L HRTQI+Y  DI+ +   L +  G  V              +R V P G ++TF++H  R  +A ++F        V     +  RD+   GF D
Sbjct:   10 VENGDLAVAWIGRNKLIPLHIEAEKTFHNQYGAFPHSEMIGKRYGEQIASTAKQGFIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEYHATRYQTALQEFREHEMLIDVGGNTHLTHRDVCKDGFLD 175          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_YARLI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica GN=TRM61 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.678e-22
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  148 IKEGDLVIVYERHDCMKAVKVCQNSA-FQNRFGAFKHS--DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAVAPTGHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            I++GDLV+ +     +K + V +    F  R+GAF H   D  G   GSM   +K GF++L+ PTPELWTL L HRTQI+Y  D S+++  L++ PG  V              +R+    G VY+++FHE+R   A+++FER  +++ +    RD+   GF
Sbjct:    9 IEDGDLVLGWMTRTAIKPIVVEKKEGLFNTRYGAFPHRNMDKYGAQLGSM---SKQGFIHLIHPTPELWTLSLPHRTQIVYTTDSSYIVQRLKIRPGSTVIESGTGSGSFTHAISRSAGLAGKVYSYEFHEERYNLAKQEFERHQLTNVIPTH-RDVCNDGF 166          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_ASPFU (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus fumigatus GN=trm61 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 63/221 (28.51%), Postives = 91/221 (41.18%), Query Frame = 1
Query:  157 GDLVIVYERHD----CMKAVKVCQNSAFQN------RFGAFKHSDWIGKPFGSMVF----------------------------SNK--------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV-------APT------GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            GDL +++ R D     +  ++  +N  ++       RFG+F HS  I +P+GS +                             SNK               GF++LL PTPELWT  L HRTQ++Y  D S+++  L + PG  +               RAV       AP       G V +F+FH QRA   RE+    G+ + V V  RD+   GF
Sbjct:   15 GDLALLHLRRDQTIPTILKLEDDENQGYKEGKVTNTRFGSFPHSTLIDQPWGSQIVASVVDTGSRGRKNQSSKKRKADDLDTPTSNKDEAQSSPGTPRAAASGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLCVRPGSTIIEAGAGSGSFTHASVRAVFNGYPSEAPAAKKRRLGKVCSFEFHAQRAQRIREEIHDHGLDALVEVTHRDVYEDGF 235          
BLAST of FC876691 vs. ExPASy Swiss-Prot
Match: TRM61_ASPOR (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae GN=trm61 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.666e-13
Identity = 53/181 (29.28%), Postives = 72/181 (39.78%), Query Frame = 1
Query:  235 RFGAFKHSDWIGKPFGSMVFSNK--------------------------------------GGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLELVPGCLVXXXXXXXXXXXXXXARAV--------APT-----GHVYTFDFHEQRAASAREDFERTGVSSFVTVGVRDIQGQGF 624
            RFG+F H     +P+GS + ++K                                       GF++LL PTPELWT  L HRTQ++Y  D S+++  L   PG  V               RAV         PT     G V +F+FH QRA   R +  + G+   V V  RD+   GF
Sbjct:   51 RFGSFPHITLCDQPWGSQIIASKVDTGSRGRTQKMKRKADELDSSTQAEDKPSPQTPVAASSGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLRARPGSTVIEAGAGSGSFTHASVRAVFNGYPSDDQPTKKRRLGKVCSFEFHAQRAEKVRVEVNQHGLDGLVEVTHRDVYEDGF 231          
The following BLAST results are available for this feature:
BLAST of FC876691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TRM61_CANGA4.625e-2336.36tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_ASHGO1.346e-2235.54tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_SCHPO5.113e-2234.34tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_YARLI6.678e-2236.42tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_ASPFU1.142e-1328.51tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]
TRM61_ASPOR5.666e-1329.28tRNA (adenine-N(1)-)-methyltransferase catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AA03RM1 EHR Citrus clementina cDNA clone KN0AAN3AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876691 ID=FC876691; Name=FC876691; organism=Citrus clementina; type=EST; length=630bp
TTCTCTCTGCCTCTCAGATTTTGCTGTCTGACTTCCTGAACCCGTCACAA
TTTTATTTGCAGATAATTGCTTGGTTTTAGTAACTCTTTGATAATTTAAA
GGATGTTGCCAACTGATCCAACGAAAAAGATATCCTTTACTCGATGCATT
AAAGAAGGGGACTTGGTTATTGTCTATGAGAGGCATGACTGCATGAAAGC
TGTTAAAGTATGCCAGAACTCAGCTTTCCAGAACCGTTTTGGTGCGTTTA
AACATTCAGACTGGATTGGGAAGCCCTTTGGGTCTATGGTGTTCAGTAAC
AAGGGCGGATTTGTTTACTTGTTAGCCCCAACTCCGGAGTTATGGACTCT
GGTTTTGAGCCATAGAACTCAGATACTTTACATTGCAGATATTAGCTTTG
TCATCATGTACTTAGAACTTGTTCCTGGTTGTTTGGTTCTGGAGTCAGGG
ACTGGAAGTGGATCTTTGACAACCTCTCTTGCAAGGGCTGTAGCTCCTAC
AGGACATGTCTATACTTTTGATTTTCATGAGCAAAGGGCTGCCTCAGCTA
GGGAAGACTTTGAGAGGACAGGAGTGAGCAGTTTTGTTACTGTGGGTGTT
AGAGATATCCAGGGTCAGGGATTTCCTGAT
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