FC876696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 3.793e-70 Identity = 133/253 (52.57%), Postives = 174/253 (68.77%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ +AEVHRK+I G +VA YM LME++ + Y+ F++YIK I DG+E +YKK HAAIR +P +K K K+ KR N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREVKK-KRVNSTKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 263.848 bits (673), Expect = 8.450e-70 Identity = 132/253 (52.17%), Postives = 174/253 (68.77%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ +AEVHRK+I G +VA YM LME++ + Y+ F++YIK + D +E +YKK HAAIR +P +K K K+ KR+N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVKK-KRWNRPKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.458e-69 Identity = 131/253 (51.78%), Postives = 174/253 (68.77%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ +AEVHRK+I G +VA YM LME++ + Y+ F++YIK + D +E +YKK HAAIR +P +K K K+ KR+N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVKK-KRWNRPKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 261.922 bits (668), Expect = 3.211e-69 Identity = 131/253 (51.78%), Postives = 173/253 (68.38%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ AEVHRK+I G +VA YM L+E++ + Y+ F++YIK + D +E +YKK HAAIR +P +K K K+ KR+N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLIEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVKK-KRWNRPKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 261.536 bits (667), Expect = 4.194e-69 Identity = 131/253 (51.78%), Postives = 173/253 (68.38%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G++Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ +AEVHRK+I G +VA YM LME++ + Y+ F++YIK + D +E +YKK HAAIR +P +K K K+ KR+N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVKK-KRWNRPKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 1.220e-68 Identity = 131/253 (51.78%), Postives = 172/253 (67.98%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVER 768 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G +Y+VE D + F LD GL +TTTGN+VF IPHS KRF G+ + K+ +AEVHRK+I G +VA YM LME++ + Y+ F++YIK + D +E +YKK HAAIR +P +K K K+ KR+N K++ ++K ++ ++ Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVKK-KRWNRPKMSLAQKKDRVAQK 283
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_OIKDI (60S ribosomal protein L5 OS=Oikopleura dioica GN=RPL5 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.492e-66 Identity = 133/253 (52.57%), Postives = 172/253 (67.98%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED-YSVEPADTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMK-KSEKPAPKEHKRYNLKKLTYEERKAKLVE 765 AR RL QDKNKYNTPKYR VVR TNKDIIAQI A + GD ++ +AYAHELPRYG+ VGLTNY+AAY TGLL+ RRVL+ +D YEG +E G++ Y A + FR LD GL +T+TG R+F IPHS KRF GF+ DGK L+AE H+ +I+GGHV YM L E+ E Y+ F+ +IK GI+++ +E +YKK HAAIRADP+ K K EK K KR+N K++Y +R+A++ + Sbjct: 42 ARKRLCVQDKNKYNTPKYRLVVRVTNKDIIAQIAYARLQGDVIVTSAYAHELPRYGVSVGLTNYSAAYATGLLIGRRVLQKFGLDSMYEGQIEVDGDEFYEEADAAEKASFRCYLDTGLARTSTGARIFGVLKGCADAGIDIPHSPKRFPGFA-DGK-LNAEAHKDHIFGGHVGDYMEKLEEENEEAYKRQFSRFIKNGINSENIEEMYKKAHAAIRADPSPKAKVEKTVDK--KRWNRAKISYAQRRARVAQ 290
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_YEAST (60S ribosomal protein L5 OS=Saccharomyces cerevisiae GN=RPL5 PE=1 SV=3) HSP 1 Score: 251.906 bits (642), Expect = 3.323e-66 Identity = 133/262 (50.76%), Postives = 171/262 (65.27%), Query Frame = 1 Query: 16 RIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPA--DTRRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEH-----KRYNLKKLTYEERKAKLVERLNAL 780 R RL+ Q K KYNTPKYR VVRFTNKDII QI+S+ I GD VLAAAY+HELPRYG+ GLTN+AAAY TGLL+ARR L+ L +D+ Y+G E GE Y + A D RPF+ LD+GL +TTTG RVF +PHS+ RF G+ + +++D E+ R YI+GGHV+ YM L +D+ E++ F Y+ IDAD LE +Y H AIRADP K +EK KE K+Y KL+ EER A++ ++ AL Sbjct: 33 RKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGE-YELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKEERAARVAAKIAAL 293
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_ANOGA (60S ribosomal protein L5 OS=Anopheles gambiae GN=RpL5 PE=2 SV=3) HSP 1 Score: 248.825 bits (634), Expect = 2.813e-65 Identity = 124/236 (52.54%), Postives = 161/236 (68.22%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRY 717 AR RLI QDKNKYNTPK+R +VR +N+DI QI A I GD ++ AAY+HELPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y G + TGE+Y VEP D FR LDVGL +TTTG RVF IPHS KRF G+S + K +AE+HR +I+G HVA YM TL E++ E ++ F++YI GI AD +E +YK HA+IR P+ + + +P+ R+ Sbjct: 32 ARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYARIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASIRIPPSRRNPRRRSPRSGGRW 267
BLAST of FC876696 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.182e-63 Identity = 130/245 (53.06%), Postives = 164/245 (66.94%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFSKDGK---QLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLT 735 AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL YG++VGLTNYAAAYCTGLLLARR+L L++D ++ G VEA GE Y VE D RRPF+ALLDVG+ TTGNRVF +PHS+KRF G+S D + DA+ HR I+G HVA YM L E++PEKY+ F+ Y+K G+D++ LE +Y K H IR +P + K K H R K LT Sbjct: 32 ARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAYLKLGLDSESLEDMYAKAHENIRKNPVLPTKPKRKLK-HVREGSKVLT 275 The following BLAST results are available for this feature:
BLAST of FC876696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876696 ID=FC876696; Name=FC876696; organism=Citrus clementina; type=EST; length=851bpback to top |