FC876791

Overview
NameFC876791
Unique NameFC876791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.428e-33
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCED-AQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPE-GLCGIATKPSYPV 445
            F++I+KN G+ TE DYPY+   G C    +      I  +EDV   DE AL +A++ QPVS+ IE  G  FQ Y+ GIF   CGT   HAV  VG+G +E+G+ YW+++NSWG +WGE GY+R+ +++ A + G CGIA + SYPV
Sbjct:  217 FQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTNLDHAVVAVGYG-SENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.171e-33
Identity = 60/145 (41.38%), Postives = 92/145 (63.45%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            R + +II N G+ T+ +YPY+  QGTC       +A I+ +  V+ NDE  ++ AV+ QP++  I+ SG +FQ YKGG+++  CG   +HA+ I+G+G       YW+++NSWG  WG+ GY+RI +DV    G+CGIA  P +P
Sbjct:   70 RAYDFIISNNGVTTDENYPYRAYQGTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGPCGFSLNHAITIIGYGRD----SYWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGIAMSPLFP 210          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.410e-33
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F++I+ N GI +E  YPY+   G C          I ++E+V  ++EQ+L +AVA QPVS+ ++ +G DFQ Y+ GIF   C    +HA+ +VG+G TE+   +W++KNSWG+ WGE+GY+R  ++++ P+G CGI    SYPV
Sbjct:   74 FQFIVNNGGINSEETYPYRGQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISANHALTVVGYG-TENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.065e-33
Identity = 64/146 (43.84%), Postives = 90/146 (61.64%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            R F+YII N GI +E  YPY    GTC+  +      I ++ +V  NDE++L +AVA QPVS+ ++ +G DFQ Y+ GIF   C    +H    VG   TE+   YW +KNSWG+ WGE+GY+R+ +++    G CGIA  PSYP+
Sbjct:   72 RAFQYIINNGGINSEEHYPYTGTNGTCDTKENAHVVSIDSYRNVPSNDEKSLQKAVANQPVSVTMDAAGRDFQLYRNGIFTGSCNISANH-YRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAESSGKCGIAISPSYPI 216          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 2.685e-32
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQ-VKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGA-TEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F +I +N G+ TE DYPY  + G C  A+  +    I  FEDV  NDE +L +AVA QPVS+ I+  G +FQ Y  G+F   CGT   H V  VG+G     G  YW ++NSWG  WGE GY+R+ ++V A  G CGIA   SYP+
Sbjct:  229 FAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGRCGTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPI 374          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.811e-32
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQ-GTC---EDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F++I+KN GI T+ DYPY     G C   ++   +V   I  +EDV  +DE++L +AVA QPVS+ IE S   FQ YK G+    CG    H V +VG+G+T  G  YW+I+NSWG  WG++GY+++ +++D P G CGIA  PSYP
Sbjct:  203 FEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVT-IDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGISLDHGVVVVGYGST-SGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYP 347          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.637e-31
Identity = 62/145 (42.76%), Postives = 95/145 (65.52%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            R F++II N+G+A+ A YPYK  +GTC+   V  +A I+ +  V  N+E +++ AV+ QP+++ ++ +  +FQ YK G+FN  CGT  +HAV  +G+G  +D + Y      WG KWGEAGY+R+ +DV +  G+CGIA  P YP
Sbjct:   70 RAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANA-NFQYYKSGVFNGPCGTSLNHAVTAIGYG--QDSIIY---PKKWGAKWGEAGYIRMARDVSSSSGICGIAIDPLYP 208          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.513e-30
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            ++YII N GI T+A+YPYK VQG C+ A   V+  I  +  V   +E AL QAVA+QP ++ I+ S   FQ Y  GIF+  CGT+ +H V IVG+ A      YW+++NSWG  WGE GY+R+L+      GLCGIA  P YP
Sbjct:   72 YQYIINNGGIDTQANYPYKAVQGPCQAASKVVS--IDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGGC--GLCGIARLPYYP 205          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.739e-29
Identity = 69/143 (48.25%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            +Y+ KN GI   + YPYK  QGTC   QV     K S    V+PN+E  LL A+A QPVS+ +E  G  FQ YKGGIF   CGT+  HAV  VG+G +  G  Y LIKNSWG  WGE GY+RI +      G+CG+     YP
Sbjct:  205 EYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 345          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.240e-28
Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAK--ISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            +Y++ N G+ TE +YPY++ QG C  A+ K   K  I+ ++ V  NDE +L+QA+A QPVS+  +  G  FQ YKGGI+   CGT   HAV  VG+G T     Y L+KNSWG  WGE GY+RI +     +G CG+ T   +P+
Sbjct:   73 QYVVDN-GVHTEREYPYEKKQGRCR-AKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDHAVTAVGYGKT-----YLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPI 210          
The following BLAST results are available for this feature:
BLAST of FC876791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
GCP1_ARATH2.428e-3346.58Germination-specific cysteine protease 1 OS=Arabid... [more]
MDO1_PSEMR3.171e-3341.38Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CPGP2_ZINOF5.410e-3342.36Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CPGP1_ZINOF7.065e-3343.84Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CYSP1_ORYSJ2.685e-3245.89Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CPR1_ARATH7.811e-3245.58Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
BROM2_ANACO8.637e-3142.76Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
ERVC_TABDI2.513e-3047.55Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
PAPA3_CARPA4.739e-2948.25Caricain OS=Carica papaya PE=1 SV=2[more]
MEX1_JACME5.240e-2844.14Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AG12RM1 EHR Citrus clementina cDNA clone KN0AAN3AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876791 ID=FC876791; Name=FC876791; organism=Citrus clementina; type=EST; length=580bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAAAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAACCTCGACAGGCTTATACGAACCTTA
TGATTCGTATGATTCTTTGGTTTTATCTAT
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