FC876791

Overview
NameFC876791
Unique NameFC876791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.167e-27
Identity = 66/144 (45.83%), Postives = 86/144 (59.72%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            +Y+ +N GI   A YPY   Q TC   QV     K +    V+ N+E +LL A+A QPVS+ +E +G DFQ+YKGGIF   CGT+  HAV  VG+G +  G  Y LIKNSWG  WGE GY+RI +      G+CG+     YP+
Sbjct:  205 QYVAQN-GIHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKS-GGKGYILIKNSWGPGWGENGYIRIRRASGNSPGVCGVYRSSYYPI 346          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.991e-27
Identity = 62/146 (42.47%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRG-CGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+YI  N GI TE  YPY+ +  +C   +  + A  + F D+   DE+ + +AVA M PVS+ I+ S   FQ Y  G++N   C  Q   H V +VG+G  E GM YWL+KNSWG  WGE GY+++ ++       CGIAT  SYP
Sbjct:  195 FRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARN---QNNQCGIATASSYP 337          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.686e-26
Identity = 61/147 (41.50%), Postives = 86/147 (58.50%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRG-CGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F+YI  N GI TE  YPY+ +  +C   +  V A    F D+   DE+ + +AVA + PVS+ I+ S   FQ Y  G++N   C  Q   H V +VGFG  E G  YWL+KNSWG  WG+ G++++L++    E  CGIA+  SYP+
Sbjct:  227 FRYIKDNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRN---KENQCGIASASSYPL 370          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.201e-26
Identity = 63/142 (44.37%), Postives = 81/142 (57.04%), Query Frame = 2
Query:   23 IIKNQGIATEADYPYKEVQGTCEDAQV-KVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++   GI     YPY+ VQ  C   +    AAK      V+P +E ALL ++A QPVS+ +E +G DFQ Y+GGIF   CG +  HAVA VG+G       Y LIKNSWG  WGE GY+RI +      G+CG+ T   YPV
Sbjct:  207 LVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 343          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.201e-26
Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 2
Query:   17 KYIIKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            +Y+  N G+ TE +YPY++ QG C   + K    +I+ ++ V  NDE +L+Q +  QPVS+  E  G  FQ YKGGIFN  CG +  HAV  +G+G  +      L KNSWG  WGE GY++I +     EG CG+     +P+
Sbjct:   73 QYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGPCGYKNDHAVTAIGYGKAQ-----LLDKNSWGPNWGEKGYIKIKRASGKSEGTCGVYKSSYFPI 211          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.755e-26
Identity = 60/150 (40.00%), Postives = 89/150 (59.33%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFGA---TEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + F+Y++KN+G+  EA YPY+   G C       +A I+++ ++ PN+    +   ++ PVS  I+ S   F+ Y GGI +   C +   +HAV +VG+G+    +DG  YWLIKNSWGE+WG  GYM+I KD       CGIA+  SYP
Sbjct:  185 QAFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKD---HNNHCGIASLASYP 331          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.405e-26
Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 2
Query:   26 IKNQGIATEADYPYKEVQGTCEDAQVK-VAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + N G+ T   YPY+  Q  C          KI+ ++ V  N E + L A+A QP+S+ +E  G  FQ YK G+F+  CGT+  HAV  VG+G T DG  Y +IKNSWG  WGE GYMR+ +     +G CG+     YP
Sbjct:  209 VANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYG-TSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYP 347          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNR-GCGT-QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            + ++YII N+GI TE+ YPYK +   C      + A +S++ +    DE AL  AV  + PVS+CI+     F SY GG++    C +   +HAV  VG+G   +G  YW++KNSWG  WGE+GY+++ ++ D     C IAT   YPV
Sbjct:  177 QAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNRD---NNCAIATYSVYPV 322          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.152e-25
Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNR-GCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + F Y++KN+G+  EA YPY+   G C       +A I+ F ++ PN+    +   ++ PVS  I+ S   F+ Y GG+++   C +   +HAV +VG+   G   DG  YWLIKNSWGE+WG  G+M+I KD       CGIA++ S+P
Sbjct:  185 QAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKD---RNNHCGIASQASFP 331          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.208e-24
Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYK-EVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPVA 448
            F+YIIKN G+ +E  YPY+ +V   C+  +  VAAKI+++++++  DE  L  A+ + PVS+ I+ S   FQ Y  G+ +   C ++   H V  VG G T++G  Y+++KNSWG  WG  GY+ + ++ D     CGI+T  SYP+A
Sbjct:  194 FEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDHGVLAVGMG-TDNGEDYYIVKNSWGPSWGLNGYIHMARNKD---NNCGISTMASYPIA 337          
The following BLAST results are available for this feature:
BLAST of FC876791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
PAPA4_CARPA1.167e-2745.83Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CATL_SARPE1.991e-2742.47Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL_DROME1.686e-2641.50Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
PAPA1_CARPA2.201e-2644.37Papain OS=Carica papaya PE=1 SV=1[more]
MEX2_JACME2.201e-2640.28Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATJ_MOUSE3.755e-2640.00Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
PAPA2_CARPA6.405e-2641.43Chymopapain OS=Carica papaya PE=1 SV=2[more]
CRUST_PANBO1.093e-2539.60Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATJ_RAT4.152e-2538.67Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CYSP3_DICDI1.208e-2439.19Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AG12RM1 EHR Citrus clementina cDNA clone KN0AAN3AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876791 ID=FC876791; Name=FC876791; organism=Citrus clementina; type=EST; length=580bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAAAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAACCTCGACAGGCTTATACGAACCTTA
TGATTCGTATGATTCTTTGGTTTTATCTAT
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