FC876791

Overview
NameFC876791
Unique NameFC876791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.075e-23
Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F+YI +N G+ +E  YPY+   G+C+       A  + F D+ P  E+AL++AVA + P+S+ ++ S P  Q Y  GI +   C ++   H V +VG+   G   +  KYWL+KNSWG++WG  GY++I KD       CG+AT  SYP+
Sbjct:  187 FQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKD---RNNHCGLATAASYPI 332          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.657e-23
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIF-NRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+YII N+GI +EA YPYK     C+      AA  S + ++    E  L +AVA + PV + ++ S P F  Y+ G++ +  C  + +H V ++G+G   +G +YWL+KNSWG  +GE GY+R+ ++       CGIA+ PSYP
Sbjct:  188 FQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDL-NGKEYWLVKNSWGSNFGEQGYIRMARN---KGNHCGIASYPSYP 328          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.657e-23
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG--ATE-DGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+  N G+ +E  YPY+  + +C+       A  + F D+ P  E+AL++AVA + P+S+ I+     F  YK GI F   C ++   H V +VG+G  +TE D  KYWL+KNSWGE+WG  GY+++ KD       CGIA+  SYP
Sbjct:  187 FQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD---RRNHCGIASAASYP 331          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.131e-22
Identity = 59/149 (39.60%), Postives = 86/149 (57.72%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y++ N G+ +EA YPY+   G C        A+I+ F  + P  E  L+ AVA + P++  I+ S   F++YKGGI++   C +   +H V +VG+   G   DG  YWLIKNSWG++WG  GYM++ KD       CGIA+   YP
Sbjct:  188 FQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSL-PQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKD---KNNHCGIASYAHYP 332          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.477e-22
Identity = 57/158 (36.08%), Postives = 91/158 (57.59%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDE-------QALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCS------HAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + F++++++ GIAT+ DYPY+  +G C+  +++    I  +E +  +DE       QA L A+  QP+S+ I+    DF  Y GGI++   G  C+      H V +VG+G+  DG+ YW+ KNSWG  WGE GY+ I ++     G+CG+    SYP
Sbjct:  204 QSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAK--DFHLYTGGIYD---GENCTSPYGINHFVLLVGYGSA-DGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYP 355          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.519e-22
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY+ V G C+     V  K+ +  ++    E  L  AV + +PVS+  E     F+ YK G++    CGT     +HAV  VG+G  EDG+ YWLIKNSWG  WG+ GY +    ++  + +CG+AT  SYP+
Sbjct:  213 SQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDEGYFK----MEMGKNMCGVATCASYPI 358          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.519e-22
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIF-NRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+YII N GI  +A YPYK     C       AA  S +  +   DE AL +AVA + PVS+ I+ S   F  YK G++ +  C    +H V +VG+G T DG  YWL+KNSWG  +G+ GY+R+ ++    +  CGIA+  SYP
Sbjct:  198 FQYIIDNGGIEADASYPYKATDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYG-TLDGKDYWLVKNSWGLNFGDQGYIRMARN---NKNHCGIASYCSYP 338          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 2.519e-22
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNR-GCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+YII N+GI ++A YPYK +   C+      AA  S + ++    E  L +AVA + PVS+ ++   P F  Y+ G++    C    +H V +VG+G   +G +YWL+KNSWG  +GE GY+R+ ++       CGIA+ PSYP
Sbjct:  189 FQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARN---KGNHCGIASFPSYP 329          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.519e-22
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNRG-CGTQCSHAVAIVGFGAT---EDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y++ N G+  EA YPY+  +G C       +AKI+ F  V P  E  L+ AVA + P++  +      F+ Y+ G+++   C +  +HAV +VG+G      DG  YWLIKNSWG++WG  GYM+I KD       C IA+   YP
Sbjct:  198 FQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKD---RNNHCAIASLAQYP 341          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.290e-22
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG--ATE-DGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+  N G+ +E  YPY+  + +C+       A  + F D+ P  E+AL++AVA + P+S+ I+     F  YK GI F   C ++   H V +VG+G  +TE D  KYWL+KNSWGE+WG  GY+++ KD       CGIA+  SYP
Sbjct:  187 FQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKD---RRNHCGIASAASYP 331          
The following BLAST results are available for this feature:
BLAST of FC876791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
CATL1_RAT5.075e-2338.67Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATS_SAIBB8.657e-2338.62Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL1_CERAE8.657e-2340.27Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATR_MOUSE1.131e-2239.60Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
P34_SOYBN1.477e-2236.08P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CYSP2_MAIZE2.519e-2238.82Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATS_MOUSE2.519e-2241.38Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_HUMAN2.519e-2238.62Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATQ_RAT2.519e-2238.51Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATL1_HUMAN3.290e-2240.27Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AG12RM1 EHR Citrus clementina cDNA clone KN0AAN3AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876791 ID=FC876791; Name=FC876791; organism=Citrus clementina; type=EST; length=580bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAAAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAACCTCGACAGGCTTATACGAACCTTA
TGATTCGTATGATTCTTTGGTTTTATCTAT
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