FC876791

Overview
NameFC876791
Unique NameFC876791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.290e-22
Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIF-NRGC---GTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI+ N+GI  E  YPY     +C     K  A + N  ++  NDE A+++AVA+  PVS   E +  DF  YK G++ ++ C     + +HAV  VG+G  ++G+ YW++KNSWG +WGE GY  I    +  + +CG+A   SYP+
Sbjct:  185 SQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLI----ERGKNMCGLAACASYPI 330          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.611e-22
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG----CGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI+ N+GI  E  YPY    G C+    K  A + N  ++  NDE A+++AVA+  PVS   E +  DF  YK G+++         + +HAV  VG+G  ++G+ YW++KNSWG  WG  GY  I    +  + +CG+A   SYP+
Sbjct:  185 SQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLI----ERGKNMCGLAACASYPI 330          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.328e-22
Identity = 57/146 (39.04%), Postives = 90/146 (61.64%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+  N+GI +E  YPY     +C  +    AAK   + ++  ++E+AL +AVA + PVS+ I+ S P FQ Y  G++ + GC  +  +HAV  VG+GA + G K+W+IKNSWG +WG  GY+ + +++   +  CGIA   S+P
Sbjct:  191 FEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGA-QKGTKHWIIKNSWGTEWGNKGYVLLARNM---KQTCGIANLASFP 332          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.328e-22
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N GI TE  YPYK V G C       A ++ +  ++  N E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    ++  + +C IAT  SYPV
Sbjct:  214 SQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVID-GFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCAIATCASYPV 359          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCG-TQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F YI  N GI TEA YPY+   G+C      VAA  S   ++    E  L QAV  + P+S+ I+ +   FQ Y  G++    C  +   HAV  VG+G+ E G  +WL+KNSW   WG+AGY+++ ++       CGIAT  SYP+
Sbjct:  180 FDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGDAGYIKMSRN---RNNNCGIATVASYPL 322          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.571e-22
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNRGCGTQC-----SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            +   K+I +N G+  E+DYPYK V GTC+  +VK  A ++    V    E  L   +A   PV++ ++ S P FQ YK G       T+C     +H V  VG+G+  +G KYW+I+NSWG  WG+AGY  + +D      +CGI    +YP
Sbjct:  159 SNSLKFIQENNGLGLESDYPYKAVAGTCK--KVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSD--TKCRSRMMNHCVTAVGYGSNSNG-KYWIIRNSWGTSWGDAGYFLLARD---SNNMCGIGRDSNYP 302          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.633e-21
Identity = 58/164 (35.37%), Postives = 82/164 (50.00%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG------------------ATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            F+YII N GI TE+ YPYK   G CE       A +S+++ V    E +L  AV + PVS+ I+ S   FQ Y  GI +   C ++   H V  VG+G                  +     +YW++KNSWG  WG  GY+ + ++ D     CGIA+  S+PV
Sbjct:  183 FEYIINNNGIDTESSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRD---NNCGIASSASFPV 343          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.132e-21
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + YI++N GIA E+DYPY     TC  + VK  AKI ++  V  N+E  L  A++   V + I+ S   FQ YK G +     TQC       +H V  VG+G   DG + W+++NSWG  WGE GY+ ++ + +     CG+AT P YP
Sbjct:  170 YNYIMEN-GIAKESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYT---DTQCKNNYFALNHEVCAVGYGVV-DGKECWIVRNSWGTGWGEKGYINMVIEGNT----CGVATDPLYP 309          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.785e-21
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCG-TQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F YI  N GI TE+ YPY+    +C      + A  +   +V+ + E+AL +AV+ + P+S+ I+ S   FQ Y  G++  + C  T   H V  VG+G TE    YWL+KNSWG  WG+AGY+++ ++ D     CGIA++PSYP
Sbjct:  179 FDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQ-HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYG-TESTKDYWLVKNSWGSSWGDAGYIKMSRNRD---NNCGIASEPSYP 319          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.785e-21
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY     TC+ +   V  ++ N  ++    E  L  AV + +PVSI  E     F+ YK G++    CG+     +HAV  VG+G  EDG+ YWLIKNSWG  WG+ GY +    ++  + +CGIAT  SYPV
Sbjct:  211 SQAFEYIKSNGGLDTEKAYPYTGKDETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIH-SFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDKGYFK----MEMGKNMCGIATCASYPV 356          
The following BLAST results are available for this feature:
BLAST of FC876791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
CATH_MOUSE3.290e-2237.50Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATH_RAT5.611e-2236.84Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATK_CHICK7.328e-2239.04Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ALEU_HORVU7.328e-2239.47Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP2_HOMAM9.571e-2239.46Digestive cysteine proteinase 2 OS=Homarus america... [more]
ACP1_ENTHI9.571e-2237.50Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP5_DICDI1.633e-2135.37Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CPP1_ENTHI2.132e-2138.67Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CYSP3_HOMAM2.785e-2139.73Digestive cysteine proteinase 3 OS=Homarus america... [more]
ALEU_ARATH2.785e-2139.47Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AG12RM1 EHR Citrus clementina cDNA clone KN0AAN3AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876791 ID=FC876791; Name=FC876791; organism=Citrus clementina; type=EST; length=580bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAAAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAACCTCGACAGGCTTATACGAACCTTA
TGATTCGTATGATTCTTTGGTTTTATCTAT
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