FC876791

Overview
NameFC876791
Unique NameFC876791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21
Identity = 58/152 (38.16%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIF-NRGCGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY    G C+ +Q  +  K+ +  ++    E  L  AVA+ +PVS+  E     F+ YK G++ +  CG      +HAV  VG+G  E+G  YWLIKNSWG  WGE GY +    ++  + +CG+AT  SYP+
Sbjct:  209 SQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVV-KGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGV-ENGTPYWLIKNSWGADWGEDGYFK----MEMGKNMCGVATCASYPI 354          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 56/150 (37.33%), Postives = 84/150 (56.00%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            + YII+N G+A E+DYPY     TC+   VK  AKI+ +  V  N+E  L  A++   V + I+ S   FQ YK G ++    T+C       +H V  VG+G   DG + W+++NSWG  WG+ GY+ ++ + +     CG+AT P YP
Sbjct:  163 YDYIIQN-GVAKESDYPYTGTDSTCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYS---DTKCKNNFFALNHEVCAVGYGVV-DGKECWIVRNSWGTGWGDKGYINMVIEGNT----CGVATDPLYP 302          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY   + +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + ++       CGIA   S+P
Sbjct:  186 FQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY   + +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + ++       CGIA   S+P
Sbjct:  186 FQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 56/146 (38.36%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY   + +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + ++       CGIA   S+P
Sbjct:  186 FQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 57/155 (36.77%), Postives = 87/155 (56.13%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N+GI  E  YPY+   G C+    K  A + +  ++  NDE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  E G+ YW++KNSWG  WG  GY  I    +  + +CG+A   S+P+
Sbjct:  187 SQAFEYIRYNKGIMGEDTYPYRGQDGDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTA-DFMMYRKGIYS---STSCHKTPDKVNHAVLAVGYG-EEKGIPYWIVKNSWGPNWGMKGYFLI----ERGKNMCGLAACASFPI 332          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGTQ---CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY  V G C      V  K+ +  ++    E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    ++  + +CGIAT  SYP+
Sbjct:  215 SQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVIN-GFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCGIATCASYPI 360          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+ +N GI +E  YPY     +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C     +HAV +VG+G T+ G KYW+IKNSWGE WG  GY+ + ++       CGI    S+P
Sbjct:  186 FQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYG-TQKGNKYWIIKNSWGESWGNKGYVLLARN---KNNACGITNLASFP 327          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21
Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N+GI  E  YPYK     C+    K  A + +  ++  NDE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  E+G+ YW++KNSWG +WG  GY  I    +  + +CG+A   SYP+
Sbjct:  187 SQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTN-DFLMYRKGIYS---STSCHKTPDKVNHAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLI----ERGKNMCGLAACASYPI 332          
BLAST of FC876791 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21
Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILKDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY      C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + ++       CGIA   S+P
Sbjct:  187 FQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGI-QKGKKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 328          
The following BLAST results are available for this feature:
BLAST of FC876791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
CYSP3_SOLLC3.637e-2138.16Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CPP3_ENTHI4.750e-2137.33Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATK_MACMU4.750e-2138.36Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA4.750e-2138.36Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN4.750e-2138.36Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATH_BOVIN4.750e-2136.77Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ORYC_ORYSJ6.204e-2138.16Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATK_RAT6.204e-2138.36Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATH_PIG6.204e-2137.42Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATK_PIG8.102e-2138.36Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AG12RM1 EHR Citrus clementina cDNA clone KN0AAN3AG12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876791 ID=FC876791; Name=FC876791; organism=Citrus clementina; type=EST; length=580bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAAAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAACCTCGACAGGCTTATACGAACCTTA
TGATTCGTATGATTCTTTGGTTTTATCTAT
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