FC876803

Overview
NameFC876803
Unique NameFC876803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length499
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.643e-15
Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK +F EG  +   K  V  +D  N  Y+ +  EG  + +  T++ +S E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD--TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.758e-15
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GGPG+IKK  FVE  +       V  +D  N   + +   G G+ +  T++ +S+E+K+   P+GGS + +  K+Y K  A   EE++K G  K +GIFKALE + +ANP+
Sbjct:   46 GNGGPGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGKAKGEGIFKALEGYCVANPD 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.758e-15
Identity = 41/113 (36.28%), Postives = 69/113 (61.06%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GGPG++KK  FVEG         V ++D     Y+ +   G G+++I  ++ +S+E+K+   P+GGS   ++ K++ K  A+  E++V+ G  K   +FKA+EA+ LANPN
Sbjct:   46 GNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.115e-15
Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK +F EG  +   K  V  +D  N  YS +  EG  V +  T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD--TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.115e-15
Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK +F EG  +   K  V  +D  N  YS +  EG  V +  T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD--TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.060e-14
Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK +F EG  +   K  V  +D  N  YS +  EG  V +  T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+K   E  + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD--TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.060e-14
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K+ V  +D  N  YS +  EG  + +  T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGD--TLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K+ V  +D  N  YS +  EG  + +  T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGD--TLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K+ V  +D  N  YS +  EG  + +  T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGD--TLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.384e-14
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  154 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPNA 495
            G+GGPG+IKK  F EG+ +   K+ V  +D  N  YS +  EG  + +  T++ +  E K+V TPDGGS   +  K++ K   E+K E +K   EK + + +A+E++ LA+ +A
Sbjct:   47 GNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGD--TLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of FC876803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
BEV1A_BETVE3.643e-1537.72Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
DRR4_PEA4.758e-1538.05Disease resistance response protein DRRG49-C OS=Pi... [more]
ABR18_PEA4.758e-1536.28ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
BEV1J_BETVE8.115e-1537.72Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1F_BETVE8.115e-1537.72Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
BEV1E_BETVE1.060e-1437.72Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1C_BETVE1.060e-1436.84Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
BEV1M_BETVE1.384e-1436.84Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
BEV1K_BETVE1.384e-1436.84Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1B_BETVE1.384e-1436.84Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CA02RM1 EHR Citrus clementina cDNA clone KN0AAN1CA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876803 ID=FC876803; Name=FC876803; organism=Citrus clementina; type=EST; length=499bp
TTTTTTTTTTTTATTTAGCCAAAAGCCAATTATATAAATTGGCATATTTG
AAAACAAAGAAACACGACATACGGAAGCCATAAACAAGATTATTCATAAT
GTTGCAACAAAGGCGACGCAAGTGCGGGGAAGTGTTGACGTAAGAGCTTA
TACGGCATTGGGGTTTGCCAAGGCAAAGGCTTCCAAAGCCTTAAAAATTC
CCTTCTCCTTTTCCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCA
CCTGGTTTGGGATAGAACTTGAAAACAACGGGGCTCTTGCTTCCTCCGTC
AGGGGTGCCCACAACCTTACTCTCATAAGAAACATGATCAATAGTAGGGA
TGTTAGCAACACCCTCACCTTCAAATGCCGTGGAACTGTATATCTTGTTC
TCTTTGTCCAAAGAACCCACCATCTGCTTAAAGCAATTCCAATCAGCACC
TTCGACAAAATTAAACTTCTTGATGCTACCAGGGCCTCCATCCCCTGAA
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