FC876803

Overview
NameFC876803
Unique NameFC876803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length499
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.028e-14
Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GGPG+IKK  F+E  +       + S+D+ N  YS +   G  + +  T + ++++SK+V  P+GGS   +  K+  K  AE  ++++K G  K   +FKA+EA+ LA+P+
Sbjct:   46 GNGGPGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVVGGAALPD--TAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.172e-13
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = -2
Query:  163 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALAN 495
            G+GGPG+IK   F EG+ +   K+ V  +D  N  YS T  EG+ + +   ++ V +E K+V  P GGS   +  KF+ K   EI  E++KG  E  + + +A+E + LA+
Sbjct:   47 GNGGPGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGD--KLEKVCHELKIVAAPGGGSILKISSKFHAKGDHEINAEEMKGAKEMAEKLLRAVETYLLAH 155          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.530e-13
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = -2
Query:  163 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALAN 495
            G+GGPG+IKK  F EG+     K+ V  +D  N  Y+ T  EG+ + +   ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E++ LA+
Sbjct:   47 GNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD--KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAH 155          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.999e-13
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = -2
Query:  160 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANP 495
            G+GGPG+IKK +FVE  +       + S+D+ N  YS +   G  VA   T + ++++SK+   P+GGS   +   ++ K  A   E+++K G  K   +FKA+EA+ LANP
Sbjct:   47 GNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGG--VALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: MPAC1_CARBE (Major pollen allergen Car b 1 isoforms 1A and 1B OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.999e-13
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = -2
Query:  163 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALAN 495
            G+GGPG+IK   F EG  +   K+ V  +D  N  Y+ T  EG+ + +   ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E++ LA+
Sbjct:   47 GNGGPGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGDVLGD--KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEKMKGAKEMAEKLLRAVESYLLAH 155          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: PR2_PHAVU (Pathogenesis-related protein 2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.453e-13
Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = -2
Query:  160 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANP 495
            G+GGPG+IKK +FVE  +       +  +D+ N  YS +   G  + +  T + +S +SK+   P+GGS   +  K++ K  A   E+++K G  K   +FK +EA+ LANP
Sbjct:   46 GNGGPGTIKKISFVEDGETKFVLHKIEEIDEANLGYSYSIVGGAALPD--TAEKISIDSKLSDGPNGGSVVKLSIKYHSKGDAPPNEDELKAGKAKSDALFKVIEAYLLANP 155          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GG G+IKK  FVE  +       V  +D  N  Y+ +   G G  +  T++ +S+E+K+   P+GGS + +  K++ K  A   EEQ+K    K  G+FKALE + LA+P+
Sbjct:   46 GNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLKTDKAKGDGLFKALEGYCLAHPD 156          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: DRR1_PEA (Disease resistance response protein Pi176 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.886e-12
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPK-PGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            G+GG G+IKK  FVE  +       V  +D  N  Y+ +   G G  +  T++ +S+E+K+   P+GGS + +  K+Y K   A   EEQ+K    K  G+FKALE + LA+P+
Sbjct:   46 GNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAAAPTEEQLKSDKAKGDGLFKALERYCLAHPD 157          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: L18A_LUPLU (Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDGGSKSPVVFKFYPKPGAEIKEEQVKGGLE-KEKGIFKALEAFALANPN 495
            G+GGPG+IKK   +     +     + ++D+ N  Y+ +   GEG+    +++ +SYESK++  PDGGS   +  KF+ K   ++  E V+   + K  G+FKA+E + LA+P+
Sbjct:   46 GNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDE--SLEKISYESKILPGPDGGSIGKINVKFHTK--GDVLSETVRDQAKFKGLGLFKAIEGYVLAHPD 155          
BLAST of FC876803 vs. ExPASy Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = -2
Query:  157 GDGGPGSIKKFNFVEGADWNCFKQMVGSLDKENKIYSSTAFEGEGVANIPTIDHVSYESKVVGTPDG-GSKSPVVFKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAFALANPN 495
            GDGG G+IK  +F EG      K  V  LDK+N  Y  +  +GE  A +P +  +SY  K+   P G GS       F+ K G+ I E+++K G E+   + KA+EA+  ANP+
Sbjct:   47 GDGGAGTIKLVHFGEGGPVPSVKHHVEELDKDNMSYKYSIVDGE--ALMPGLQSISYVIKI--EPSGHGSVCKHNTTFHFKAGSNINEDEIKAGKERAAEMIKAVEAYVQANPD 156          
The following BLAST results are available for this feature:
BLAST of FC876803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
SAM22_SOYBN4.028e-1434.51Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
MPAC1_CORAV1.172e-1336.04Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
MPAC2_CARBE1.530e-1336.04Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]
PR1_PHAVU1.999e-1336.61Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
MPAC1_CARBE1.999e-1335.14Major pollen allergen Car b 1 isoforms 1A and 1B O... [more]
PR2_PHAVU4.453e-1334.82Pathogenesis-related protein 2 OS=Phaseolus vulgar... [more]
DRR3_PEA5.816e-1336.28Disease resistance response protein Pi49 OS=Pisum ... [more]
DRR1_PEA2.886e-1236.84Disease resistance response protein Pi176 OS=Pisum... [more]
L18A_LUPLU3.191e-1133.33Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV... [more]
IPRT1_CATRO3.191e-1137.72Probable intracellular pathogenesis-related protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CA02RM1 EHR Citrus clementina cDNA clone KN0AAN1CA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876803 ID=FC876803; Name=FC876803; organism=Citrus clementina; type=EST; length=499bp
TTTTTTTTTTTTATTTAGCCAAAAGCCAATTATATAAATTGGCATATTTG
AAAACAAAGAAACACGACATACGGAAGCCATAAACAAGATTATTCATAAT
GTTGCAACAAAGGCGACGCAAGTGCGGGGAAGTGTTGACGTAAGAGCTTA
TACGGCATTGGGGTTTGCCAAGGCAAAGGCTTCCAAAGCCTTAAAAATTC
CCTTCTCCTTTTCCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCA
CCTGGTTTGGGATAGAACTTGAAAACAACGGGGCTCTTGCTTCCTCCGTC
AGGGGTGCCCACAACCTTACTCTCATAAGAAACATGATCAATAGTAGGGA
TGTTAGCAACACCCTCACCTTCAAATGCCGTGGAACTGTATATCTTGTTC
TCTTTGTCCAAAGAACCCACCATCTGCTTAAAGCAATTCCAATCAGCACC
TTCGACAAAATTAAACTTCTTGATGCTACCAGGGCCTCCATCCCCTGAA
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