FC876814

Overview
NameFC876814
Unique NameFC876814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.218e-90
Identity = 148/260 (56.92%), Postives = 196/260 (75.38%), Query Frame = 2
Query:   14 KKEFIWSMMGGQTTQQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784
            +KE IWSM G Q  +QGDCS  K   N+PH CKK PTVVDLLPG P + QIANCCK G +S+++QDP  +  SFQ+ VG +G +N+TVRVPKNF+L APGPGYTC  A + KP++F++ D RR TQ +MT NV CTYSQFLAQK P+CCVSLSSF N+  V CPTC+CGC+N  + +G C+    P L S+++ PG+   +P++QCTSHMCP++++WH+ L  KE++RVKIT+TN NY MN++ WNLVVQ+    ++TQ+
Sbjct:   79 QKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQI 338          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.223e-72
Identity = 126/259 (48.65%), Postives = 169/259 (65.25%), Query Frame = 2
Query:   17 KEFIWSMMGGQTTQQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784
            +E IW M G +TT+QG+CS +   GN+PHCC + PT+VDLLPG   N Q+ANCC+GGV++S +QD    +++F +TVG++    +   +P NF +  PG  Y+C  A    PTKF T   RR TQA+ T    C YSQF +  +P CCVSLS+FY + IV CPTC+CGC      S  C+   + P      + P +   P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN   NY+ WNLVV HPN  ++ Q+
Sbjct:   88 QEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQV 339          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.827e-68
Identity = 128/267 (47.94%), Postives = 166/267 (62.17%), Query Frame = 2
Query:    5 RGAKKEFIWSMMGGQTTQQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTT-----NKTVRVPKNFTLKAPGPGYTCGPA-KVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784
            R A  E IW M G + T+QGDC + +G   PHCC+K P +VDL PGTPYN Q+++CC+GGV+SS  Q+  T+  +FQ+ VG          ++   +P  F +  PG  Y+C  A KV   +       R      +T  VTCTYSQF+   +PTCCVSLSSFYN TIV CP C+CGC  + T        + P L +     G+   P+ +CT HMCP+RVHWHVK++Y+EYWRVK+TITN+N   NYS WNLVVQHPN  +LTQL
Sbjct:   70 RWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRARAPCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQL 331          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.248e-41
Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 2
Query:    5 RGAKKEFIWSMMGGQTTQQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTY 418
            RG KKE IW+M+G +TT QG CS +KGNIP  C + PTVVDLLPGTP+NQQIANCCK GV+   ++      ++FQL+VG+AG + KT R+P NF   AP   Y CGP+K  +PT+F T+D RR+T A+MT N+TC +
Sbjct:   69 RGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19
Identity = 76/286 (26.57%), Postives = 126/286 (44.06%), Query Frame = 2
Query:   14 KKEFIWSMMGGQTT--QQGDC------SKYK----GNIPHCCKKDPTVVDLLPGTPYNQQ----IANCCKGGVISSWAQDPTTALNSFQLTVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFITSDNRRVTQ-AMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPN 763
            + EFI++M G   +     DC        Y+     N+  C ++ PTV+DL P T YN      I  CC+ G I   + DP+ + + FQ+ V           +  P+N+ +     P Y CGP     P++F+        + A  +  V C  +Q     +P CCVS S+++N++IV C TCACGC +N         + S + P+   L    N             +P    + C  + C + ++WH+  +Y+  W  ++T+ N+    ++  W   VQ  N
Sbjct:  259 RDEFIYTMKGAYPSIVDSSDCVDGPQAKHYQDLDFSNVLSCARR-PTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNWG-ETDFVDWFTAVQMKN 539          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19
Identity = 62/243 (25.51%), Postives = 105/243 (43.21%), Query Frame = 2
Query:  101 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALNSFQLTVGAAGT--TNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKF-----ITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ 754
            C++ P ++DL P    +  + N   CC+ G I     DP+ +++ F + V           +  P+N+ +K    P Y+CGP     PT +     + ++        + CN+T   ++      P CCVS S+F+N++I+ C TCACGC +    + S   P                  L    N       P        C + ++WH+  +Y+  W V+ITI N+   +++  W L VQ
Sbjct:  298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTEI-----PKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQ 534          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 72/252 (28.57%), Postives = 108/252 (42.86%), Query Frame = 2
Query:  101 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALNSFQLTV-GAAGTTNKTVRVPKNFTLKAPG---PGYTCGPAKVGKPTKFIT-SDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ----HPNYDNL 775
            C++ P + DL P    +        CCK G +     DP+ + + FQL V       N+T   P     K  G   P Y CGP     P++F   S    VT A+ +  V C  ++  AQ +  CCVS S+FYN + V C TCACGC +  T+     S   + P    L    N   K          P    + C  + C + ++WHV  +YK  W  ++T+ N+     +  W + +      P Y+N+
Sbjct:  311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHW-KIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNWR-DFAFEDWFVAIDMGKAGPGYENV 558          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15
Identity = 68/269 (25.28%), Postives = 119/269 (44.24%), Query Frame = 2
Query:   14 KKEFIWSMMGG--QTTQQGDC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQ----QIANCCKGGVISSWAQDPTTALNSFQLTVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFI-TSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 712
            K EF++S  G         DC     +KY  ++       C + P ++DL P T YN     +I  CC+ G I   + DP  + + FQ+ V          ++  P+++ +K    P Y CGP      ++F  TS       A  +  V C  +Q      P CCVS SS++N++++ C TCACG  ++   + +C         P+ A ++    +           NR +   + C  + C + ++WH+  +Y+  W  ++T+ N+
Sbjct:  252 KDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNW 515          
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14
Identity = 72/268 (26.87%), Postives = 115/268 (42.91%), Query Frame = 2
Query:   20 EFIWSMMGGQTTQQG--DC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQQIAN----CCKGGVISSWAQDPTTALNSFQLTV-GAAGTTNKTVRVP-KNFTLKA-PGPGYTCGPAKVGKPTKFIT-SDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 712
            EFI SM G    ++   +C      ++ G++       C+K P + DL P    +  +      CCK G +     DP+ +   FQL V       N+T   P +N+ +     P Y CGP      T F   S  +  T A+ +  V C  ++   Q    CCVS S+FYN++ + C TCACGC++  T++    N     L    +T   P  NR +                + C  + C I ++WH+  +Y   W  ++T+ N+
Sbjct:  263 EFIHSMRGAYAAEKNTLECLSSKAGQFYGDLDFSQVANCQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFNW 524          
The following BLAST results are available for this feature:
BLAST of FC876814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
COBL4_ORYSJ2.218e-9056.92COBRA-like protein 4 OS=Oryza sativa subsp. japoni... [more]
COBL6_ARATH1.223e-7248.65COBRA-like protein 6 OS=Arabidopsis thaliana GN=CO... [more]
COBL7_ORYSJ1.827e-6847.94COBRA-like protein 7 OS=Oryza sativa subsp. japoni... [more]
COBL5_ARATH3.248e-4155.80COBRA-like protein 5 OS=Arabidopsis thaliana GN=CO... [more]
COBL7_ARATH1.569e-1926.57COBRA-like protein 7 OS=Arabidopsis thaliana GN=CO... [more]
COBL9_ARATH7.784e-1925.51COBRA-like protein 9 OS=Arabidopsis thaliana GN=CO... [more]
CBL10_ARATH1.917e-1728.57COBRA-like protein 10 OS=Arabidopsis thaliana GN=C... [more]
COBL8_ARATH1.374e-1525.28COBRA-like protein 8 OS=Arabidopsis thaliana GN=CO... [more]
CBL11_ARATH4.420e-1426.87COBRA-like protein 11 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CB10RM1 EHR Citrus clementina cDNA clone KN0AAN1CB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876814 ID=FC876814; Name=FC876814; organism=Citrus clementina; type=EST; length=786bp
CGCACGAGGGGCAAAAAAGGAATTCATCTGGAGCATGATGGGAGGACAAA
CCACACAGCAAGGAGATTGTTCAAAATATAAAGGGAACATCCCACATTGC
TGCAAGAAGGATCCAACAGTTGTAGATTTGTTGCCGGGGACTCCATATAA
CCAGCAAATTGCAAATTGTTGCAAAGGGGGAGTAATAAGCTCCTGGGCAC
AGGACCCAACTACTGCATTAAACTCATTCCAGCTCACTGTTGGTGCTGCA
GGAACAACTAACAAAACTGTCAGAGTACCCAAAAATTTCACACTTAAAGC
CCCAGGGCCTGGATATACTTGTGGACCTGCAAAAGTTGGTAAACCAACTA
AATTCATTACGTCAGATAACAGGAGAGTCACACAAGCTATGATGACCTGC
AATGTCACATGCACATATTCACAGTTCTTGGCTCAAAAGACACCCACCTG
TTGTGTTTCTCTCTCTTCCTTCTACAATGAAACAATAGTAAGCTGCCCAA
CGTGTGCTTGTGGCTGTCAAAACAATGGAACGGAATCTGGGAGTTGCATA
AATCCAAAGACTCCACATTTGGCATCAGTTGTGAATACTCCAGGAAAACC
CAACAGACCAATGGTTCAGTGTACCAGCCATATGTGTCCCATCCGAGTTC
ATTGGCATGTCAAGCTCAATTATAAGGAGTACTGGCGTGTGAAGATCACA
ATCACTAATTTTAATTACGCAATGAATTACTCACTGTGGAATCTAGTCGT
GCAACACCCCAACTATGATAATCTCACACAGCTTTT
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