FC876814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.218e-90 Identity = 148/260 (56.92%), Postives = 196/260 (75.38%), Query Frame = 2 Query: 14 KKEFIWSMMGGQTTQQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784 +KE IWSM G Q +QGDCS K N+PH CKK PTVVDLLPG P + QIANCCK G +S+++QDP + SFQ+ VG +G +N+TVRVPKNF+L APGPGYTC A + KP++F++ D RR TQ +MT NV CTYSQFLAQK P+CCVSLSSF N+ V CPTC+CGC+N + +G C+ P L S+++ PG+ +P++QCTSHMCP++++WH+ L KE++RVKIT+TN NY MN++ WNLVVQ+ ++TQ+ Sbjct: 79 QKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQI 338
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 273.092 bits (697), Expect = 1.223e-72 Identity = 126/259 (48.65%), Postives = 169/259 (65.25%), Query Frame = 2 Query: 17 KEFIWSMMGGQTTQQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784 +E IW M G +TT+QG+CS + GN+PHCC + PT+VDLLPG N Q+ANCC+GGV++S +QD +++F +TVG++ + +P NF + PG Y+C A PTKF T RR TQA+ T C YSQF + +P CCVSLS+FY + IV CPTC+CGC S C+ + P + P + P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN NY+ WNLVV HPN ++ Q+ Sbjct: 88 QEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQV 339
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.827e-68 Identity = 128/267 (47.94%), Postives = 166/267 (62.17%), Query Frame = 2 Query: 5 RGAKKEFIWSMMGGQTTQQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTT-----NKTVRVPKNFTLKAPGPGYTCGPA-KVGKPTKFITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNYDNLTQL 784 R A E IW M G + T+QGDC + +G PHCC+K P +VDL PGTPYN Q+++CC+GGV+SS Q+ T+ +FQ+ VG ++ +P F + PG Y+C A KV + R +T VTCTYSQF+ +PTCCVSLSSFYN TIV CP C+CGC + T + P L + G+ P+ +CT HMCP+RVHWHVK++Y+EYWRVK+TITN+N NYS WNLVVQHPN +LTQL Sbjct: 70 RWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRARAPCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQL 331
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.248e-41 Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 5 RGAKKEFIWSMMGGQTTQQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALNSFQLTVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDNRRVTQAMMTCNVTCTY 418 RG KKE IW+M+G +TT QG CS +KGNIP C + PTVVDLLPGTP+NQQIANCCK GV+ ++ ++FQL+VG+AG + KT R+P NF AP Y CGP+K +PT+F T+D RR+T A+MT N+TC + Sbjct: 69 RGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19 Identity = 76/286 (26.57%), Postives = 126/286 (44.06%), Query Frame = 2 Query: 14 KKEFIWSMMGGQTT--QQGDC------SKYK----GNIPHCCKKDPTVVDLLPGTPYNQQ----IANCCKGGVISSWAQDPTTALNSFQLTVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFITSDNRRVTQ-AMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPN 763 + EFI++M G + DC Y+ N+ C ++ PTV+DL P T YN I CC+ G I + DP+ + + FQ+ V + P+N+ + P Y CGP P++F+ + A + V C +Q +P CCVS S+++N++IV C TCACGC +N + S + P+ L N +P + C + C + ++WH+ +Y+ W ++T+ N+ ++ W VQ N Sbjct: 259 RDEFIYTMKGAYPSIVDSSDCVDGPQAKHYQDLDFSNVLSCARR-PTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNWG-ETDFVDWFTAVQMKN 539
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19 Identity = 62/243 (25.51%), Postives = 105/243 (43.21%), Query Frame = 2 Query: 101 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALNSFQLTVGAAGT--TNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKF-----ITSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ 754 C++ P ++DL P + + N CC+ G I DP+ +++ F + V + P+N+ +K P Y+CGP PT + + ++ + CN+T ++ P CCVS S+F+N++I+ C TCACGC + + S P L N P C + ++WH+ +Y+ W V+ITI N+ +++ W L VQ Sbjct: 298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTEI-----PKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQ 534
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17 Identity = 72/252 (28.57%), Postives = 108/252 (42.86%), Query Frame = 2 Query: 101 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALNSFQLTV-GAAGTTNKTVRVPKNFTLKAPG---PGYTCGPAKVGKPTKFIT-SDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQ----HPNYDNL 775 C++ P + DL P + CCK G + DP+ + + FQL V N+T P K G P Y CGP P++F S VT A+ + V C ++ AQ + CCVS S+FYN + V C TCACGC + T+ S + P L N K P + C + C + ++WHV +YK W ++T+ N+ + W + + P Y+N+ Sbjct: 311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHW-KIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNWR-DFAFEDWFVAIDMGKAGPGYENV 558
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15 Identity = 68/269 (25.28%), Postives = 119/269 (44.24%), Query Frame = 2 Query: 14 KKEFIWSMMGG--QTTQQGDC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQ----QIANCCKGGVISSWAQDPTTALNSFQLTVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFI-TSDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 712 K EF++S G DC +KY ++ C + P ++DL P T YN +I CC+ G I + DP + + FQ+ V ++ P+++ +K P Y CGP ++F TS A + V C +Q P CCVS SS++N++++ C TCACG ++ + +C P+ A ++ + NR + + C + C + ++WH+ +Y+ W ++T+ N+ Sbjct: 252 KDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNW 515
BLAST of FC876814 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 72/268 (26.87%), Postives = 115/268 (42.91%), Query Frame = 2 Query: 20 EFIWSMMGGQTTQQG--DC-----SKYKGNIPHC----CKKDPTVVDLLPGTPYNQQIAN----CCKGGVISSWAQDPTTALNSFQLTV-GAAGTTNKTVRVP-KNFTLKA-PGPGYTCGPAKVGKPTKFIT-SDNRRVTQAMMTCNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 712 EFI SM G ++ +C ++ G++ C+K P + DL P + + CCK G + DP+ + FQL V N+T P +N+ + P Y CGP T F S + T A+ + V C ++ Q CCVS S+FYN++ + C TCACGC++ T++ N L +T P NR + + C + C I ++WH+ +Y W ++T+ N+ Sbjct: 263 EFIHSMRGAYAAEKNTLECLSSKAGQFYGDLDFSQVANCQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFNW 524 The following BLAST results are available for this feature:
BLAST of FC876814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876814 ID=FC876814; Name=FC876814; organism=Citrus clementina; type=EST; length=786bpback to top |