FC876820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_PYRAB (3-isopropylmalate dehydratase large subunit 1 OS=Pyrococcus abyssi GN=leuC1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.442e-26 Identity = 73/201 (36.32%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 11 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRA-LARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 T Y++++ ++ SDE A + +D++ EP+VA PH P+N +++ K ++KID+V+IGSCT G+ ED AA++ G+KV V ++P + V+ + +IF EAG PTCG CLGG A VSTTNRNF G MGH + +YLA+PY AA SA+ + P+E Sbjct: 234 TLDYVKERAKRKFKVYKSDEDAKYYKVIEYDVTNWEPVVAFPHLPENTVPISKAAKMNIKIDQVFIGSCTNGRIEDLRMAAEIL--EGQKVAKWVRLIVIPCSPTVYWKALK--------EGLIEIFLEAGA-VIGPPTCGPCLGGHMGVLASGER---AVSTTNRNFVGRMGHPKSEVYLANPYVAAASAVLGRIASPEE 420
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_PYRAE (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum aerophilum GN=leuC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 2 Query: 11 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 T +YL+ + + Y P E ++ +Y ++ +LEPLVA P+S DN RE + V++D+V+IGSCT G+ D AAK+ G++VK +PA+ +V+ L + EAGC TCG CLGG + V V+T+NRNF G +GH + IYLA+P AA +A + DP+ +L Sbjct: 230 TAEYLKTERGVDYTPPRI-EPGNYADKYTVELPRLEPLVAAPYSVDNIKSVREVEGVEVDQVFIGSCTNGRLSDIAVAAKIL--KGRRVKSRCIAIPASYEVFRRAMKLGY--------IDVLTEAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVTTSNRNFRGRVGHPDAKIYLANPAVAAATAAEGKIADPRPYL 413
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_PYRCJ (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=leuC PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.584e-25 Identity = 71/201 (35.32%), Postives = 105/201 (52.24%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 E T YL + + Y+P + EY ++ +LEPLVA PHS DN E + +++D+V+IGSCT G+ D AAK+ L G +VK +PA+ V+ L + +AGC TCG CLGG + V ++T+NRNF G +GH + +YLA+P AA +ALT + DP+++L Sbjct: 228 EVTVAYLHEARGVSYKPPALGG-GKYADEYTVELGRLEPLVAAPHSVDNVKAVAEVEGIEVDQVFIGSCTNGRLSDIEVAAKI-LRHG-RVKARCIAIPASYDVFRRAMELGY--------VDVLTKAGC-VVTYGTCGPCLGG---HFGVAGPGEVVLTTSNRNFKGRVGHPDSKVYLANPAVAAATALTGRITDPRQYL 413
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_THETN (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter tengcongensis GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.068e-25 Identity = 72/201 (35.82%), Postives = 103/201 (51.24%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T Y++ + Y+ DE A + ++ + P VA PH P+N E VKID+V IGSCT G+ D A ++ GKKV V + PATQ+++++ + + F +AG ++PTCG CLGG A+ ++TTNRNF G MGH E +YLASP AA SA+ Y+ P+E Sbjct: 230 EITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYRIL--KGKKVHPDVRLIIFPATQEIYLECVK--------RGYIEEFIKAGA-AVSTPTCGPCLGGHMGVLAKGER---ALATTNRNFVGRMGHPESEVYLASPAVAAASAIAGYIVSPEE 416
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_THEP3 (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.068e-25 Identity = 72/201 (35.82%), Postives = 103/201 (51.24%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T Y++ + Y+ D A + Y + ++ P VA PH P+N E VKID+V IGSCT G+ D A K+ GKKV V + PATQ+++++ + + F +AG ++PTCG CLGG A+ ++TTNRNF G MGH E +YL+SP AA SA+ Y+ P+E Sbjct: 230 EITEAYVKGRAKREYKVFERDVDAEYSEVYEISLDEIRPQVAFPHLPENTRNIDEVGKVKIDQVVIGSCTNGRISDMEIAYKIL--KGKKVHPDVRLLIFPATQEIYLECVK--------RGYIEEFIKAGA-AVSTPTCGPCLGGHMGILAKGER---ALATTNRNFVGRMGHPESEVYLSSPAVAAASAIAGYIVSPEE 416
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_GEOSL (3-isopropylmalate dehydratase large subunit OS=Geobacter sulfurreducens GN=leuC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 76/185 (41.08%), Postives = 100/185 (54.05%), Query Frame = 2 Query: 62 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAG-CDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 SDE A + FD+S LEP+V + PD E +D+VY+GSCT G+ ED AA++ GKK+ V L PAT K++ D + IF EAG C T +PTCGACLG A E VC STTNRNF G MG K G ++L SP T+A +A+ + DP+++L Sbjct: 259 SDEDAVYEQVLDFDVSSLEPIVTFGYKPDQVKPVSEIAGTPVDQVYLGSCTNGRLEDLRIAARIL--KGKKIAPTVRGILSPATPKIYQDAMR--------EGLIDIFMEAGFCVT--NPTCGACLGMSNGVLA---EGEVCASTTNRNFMGRMG-KGGMVHLMSPATSAATAIEGKIADPRKYL 427
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_METJA (Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannaschii GN=leuC PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 72/205 (35.12%), Postives = 104/205 (50.73%), Query Frame = 2 Query: 5 EATFKYLEDK-----TSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV-KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y+++ T P+E + DE A F Y + K+EP+ A PH+ DN ARE ID+V+IGSCT G+ ED A K+ G V + PA+++ ++ + + F + GC +P+C AC+G Y + VCVST+NRNF G G E IYLASP TAA A+ + DP++ Sbjct: 231 EKTIQYVKEAMKKHGTERPFEVIKGDEDAEFAEVYEIEADKIEPVFACPHNVDNVKQAREVAGKPIDQVFIGSCTNGRLEDLRMAIKIIEKHGGIADDVRVVVTPASREEYLKALK--------EGIIEKFLKYGC-VVTNPSCSACMG---SLYGVLGPGEVCVSTSNRNFRGRQGSLEAEIYLASPITAAACAVKGELVDPRD 423
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CAMHC (3-isopropylmalate dehydratase large subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=leuC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 79/204 (38.73%), Postives = 108/204 (52.94%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 E T ++ +DK +L EP YSDE A + D+S LEP+VA P P N + ++KID+ +IGSCT G+ D AA++ GKKV T L+ PATQK++ + + IF +AG ++PTCGACLGG CVSTTNRNF G MG + +YLA+ A SA+T + DP+ Sbjct: 230 EITKQFFKDK-NLRAEPKYFYSDEDAFYERTVEIDMSALEPMVAYPFLPSNGKTITQAVADELKIDQAFIGSCTNGRLSDLRIAAEIL--KGKKVAKKTRLIITPATQKIYKA--------AEHEGLIDIFIDAGA-VVSNPTCGACLGGYMGILGANER---CVSTTNRNFVGRMGDRTSEVYLANSAVVAASAITGKITDPR 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_SYNAS (3-isopropylmalate dehydratase large subunit OS=Syntrophus aciditrophicus (strain SB) GN=leuC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.341e-24 Identity = 70/199 (35.18%), Postives = 100/199 (50.25%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T Y++ + PY SD A++ D++++EP VA PH P N E V +D+V IGSCT G+ ED AAA V +V ++PATQ ++Y + + + IF +A ++PTCG CLGG A ++TTNRNF G MGH +YL++P AA SA+ + P E Sbjct: 232 EITEAYVKPRAKRPYTFYASDPDAAYAQVIEIDVNRIEPQVAFPHLPSNTKGISEVGQVPLDQVVIGSCTNGRIEDLRAAAAVLKGRKADPRVRLIVIPATQ----EIYRMAMK----EGLFDIFLDANA-AISTPTCGPCLGGHMGILAAGER---ALATTNRNFVGRMGHPRSEVYLSNPAVAAASAVLGRIAGPDE 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC5 (3-isopropylmalate dehydratase large subunit OS=Campylobacter curvus (strain 525.92) GN=leuC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.341e-24 Identity = 79/205 (38.54%), Postives = 106/205 (51.71%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEP--VYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T ++L+ K +L EP YSDE A + KL+P++A P P N RE D+ ID+ +IGSCT G+ D AA++ G+KV T L+ PATQK+ + + IF EAG ++PTCGACLGG CVSTTNRNF G MG + +YLA+ AA SA+ + DP+E Sbjct: 231 ETTREFLKGK-NLRAEPKFFYSDEGAGYERVLEIYADKLDPVIAYPFLPSNGKSVREAVKDDIAIDQAFIGSCTNGRLSDLRIAAEIL--KGRKVSRKTRLIITPATQKIALAAQK--------EGLMDIFVEAGA-VVSNPTCGACLGGYMGILGAGER---CVSTTNRNFVGRMGDRTSEVYLANSAVAAASAIAGKIADPRE 420 The following BLAST results are available for this feature:
BLAST of FC876820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876820 ID=FC876820; Name=FC876820; organism=Citrus clementina; type=EST; length=607bpback to top |