FC876821

Overview
NameFC876821
Unique NameFC876821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length248
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.923e-25
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR AS ++IPSSTGAAKAVGKVLP L G LTG++F VPT DVS+V+L V+L K  TYEE+K
Sbjct:  179 TATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKPATYEEIK 256          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 6.923e-25
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR AS ++IPSSTGAAKAVGKVLP L G LTG++F VPT DVS+V+L V+L K  TYEE+K
Sbjct:  179 TATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKPATYEEIK 256          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWR GR+A  ++IP+STGAAKAVGKVLPAL G LTG+SF VP  DVS+V+L VRLEK+ TYEE+K
Sbjct:  181 TATQKTVDGPSGKDWRAGRSALSNIIPASTGAAKAVGKVLPALNGKLTGMSFRVPNCDVSVVDLTVRLEKKATYEEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25
Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P+L G LTG+SF +PT DVS+V+L VRLEK  +Y+++K
Sbjct:  181 TATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRIPTSDVSVVDLVVRLEKGASYDQIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25
Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGRA + ++IPSSTGAAKAVGKV+P L G LTGL+F VPT DVS+V+L VRL K T+YEE+K
Sbjct:  160 TATQKTVDGPSPKDWRGGRAVNNNIIPSSTGAAKAVGKVIPVLNGKLTGLAFRVPTLDVSVVDLVVRLAKPTSYEEIK 237          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.041e-25
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A  ++IPSSTGAAKAVGKVLP L G LTG++F VPT DVS+V+L VRL  ET+Y+++K
Sbjct:  182 TATQKTVDGPSQKDWRGGRGAGANIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTSDVSVVDLTVRLATETSYDDIK 259          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_PHARH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffia rhodozyma GN=GPD PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24
Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A  ++IPSSTGAAKAVGKV+P+L G LTG++F VPT DVS+V+L VR+EK  +YEE+K
Sbjct:  181 TATQKTVDGPSNKDWRGGRGAGANIIPSSTGAAKAVGKVIPSLNGKLTGMAFRVPTPDVSVVDLVVRIEKGASYEEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_ESCBL (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia blattae GN=gap PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.181e-24
Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR AS ++IPSSTGAAKAVGKVLP L G LTG++F VPT +VS+V+L VRL K  TYEE+K
Sbjct:  165 TATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLAKPATYEEIK 242          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.542e-24
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGRA   ++IPSSTGAAKAVGKV+P+L G LTGLSF VPT DVS+++L VRLEK  +YE++K
Sbjct:  180 TATQKTVDGPSNKDWRGGRAVVNNIIPSSTGAAKAVGKVIPSLNGKLTGLSFRVPTIDVSVIDLVVRLEKPASYEDIK 257          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.542e-24
Identity = 55/78 (70.51%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKVLP L G LTG++F VPT +VS+V+L VRLEK  +YEE+K
Sbjct:  174 TATQKTVDGPSHKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAASYEEIK 251          
The following BLAST results are available for this feature:
BLAST of FC876821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
G3P3_KLUMA6.923e-2571.79Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA6.923e-2571.79Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_DICDI9.041e-2571.79Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]
G3P_CRYCU9.041e-2567.95Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_BOLED9.041e-2571.79Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PC_GRAVE9.041e-2569.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PHARH1.181e-2469.23Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffi... [more]
G3P_ESCBL1.181e-2471.79Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_LYOSH1.542e-2470.51Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_KLEPN1.542e-2470.51Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CC09RM1 EHR Citrus clementina cDNA clone KN0AAN1CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876821 ID=FC876821; Name=FC876821; organism=Citrus clementina; type=EST; length=248bp
GCACGAGGCACTGCCACTCACAAGACTGTTGATGGACCATCAATGAACGA
CTGGAGAGGTGGCAGAGCTGCTTCCTTCGACCTCATTCCCAGCAGCACCG
GTGCTGCCAAGGCAGTTGGTAAGGTTTTGCCTGCCCTTGCTGGTACATTG
ACCGGACTGTCCTTCCCAGTTCCTACCGGTGATGTCTCAATGGTCAACCT
CCCTGTCCGACTTGAAAAGGAGACGACTTATGAGGAACTTAAAAATGC
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