FC876821

Overview
NameFC876821
Unique NameFC876821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length248
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24
Identity = 53/77 (68.83%), Postives = 64/77 (83.12%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEEL 240
            TAT KTVDGPS+ DWRGGR AS ++IPSSTGA KAVGKV PAL G LTG++F VPT +VS+V+L VRLEK  TY+++
Sbjct:  179 TATQKTVDGPSLKDWRGGRGASQNIIPSSTGAPKAVGKVYPALDGKLTGMAFRVPTPNVSVVDLTVRLEKPATYKDI 255          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.996e-24
Identity = 51/77 (66.23%), Postives = 65/77 (84.42%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEEL 240
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+PA+ G +TG+SF VP+ +VS+++L VRLEK  +YEE+
Sbjct:  181 TATQKTVDGPSGKDWRGGRGAAQNIIPSSTGAAKAVGKVIPAMNGKITGMSFRVPSANVSVIDLTVRLEKAASYEEI 257          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.996e-24
Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR+ + ++IPSSTGAAKAVGKV+P+L G LTGL+F VPT DVS+V+L  R EK  TY+E+K
Sbjct:  181 TATQKTVDGPSNKDWRGGRSVNGNIIPSSTGAAKAVGKVIPSLNGKLTGLAFRVPTLDVSVVDLVCRTEKSATYDEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.306e-23
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT K VDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P L G LTG+S  VPT +VS+V+L VRLEK  TY+E+K
Sbjct:  181 TATQKVVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRVPTSNVSVVDLTVRLEKGATYDEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P L G LTG+S  VPT +VS+V+L VR+EK  +Y+E+K
Sbjct:  181 TATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRVPTANVSVVDLTVRIEKGASYDEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P L G LTG+S  VPT  VS+V+L VR+EK  +Y+E+K
Sbjct:  182 TATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTGMSMRVPTATVSVVDLTVRIEKAASYDEIK 259          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 52/78 (66.67%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P L G LTG++F VPT +VS+V+L VRL KE +Y+++K
Sbjct:  178 TATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIK 255          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT K VDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P+L G LTG+S  VPT +VS+V+L  RLEK  TY+E+K
Sbjct:  182 TATQKVVDGPSNKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTSNVSVVDLTARLEKAATYDEIK 259          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGA KAVGKV+P L G LTG+S  VPT +VS+V+L VR+EK  TY+E+K
Sbjct:  181 TATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAPKAVGKVIPELNGKLTGMSMRVPTANVSVVDLTVRIEKGATYDEIK 258          
BLAST of FC876821 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.705e-23
Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   10 TATHKTVDGPSMNDWRGGRAASFDLIPSSTGAAKAVGKVLPALAGTLTGLSFPVPTGDVSMVNLPVRLEKETTYEELK 243
            TAT KTVDGPS  DWRGGR A+ ++IPSSTGAAKAVGKV+P L G LTG+S  VPT +VS+V+L VR+EK  TY+E+K
Sbjct:  181 TATQKTVDGPSGKDWRGGRGAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRVPTPNVSVVDLTVRIEKGATYDEIK 258          
The following BLAST results are available for this feature:
BLAST of FC876821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
G3PC_LEIME7.654e-2468.83Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_TRIAT9.996e-2466.23Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P_LENED9.996e-2467.95Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_PHANO1.306e-2367.95Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_SORMA1.705e-2366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P_SCLSC1.705e-2366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_PANVR1.705e-2366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_MONAN1.705e-2366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_COLLN1.705e-2366.67Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_CLAPU1.705e-2367.95Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CC09RM1 EHR Citrus clementina cDNA clone KN0AAN1CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876821 ID=FC876821; Name=FC876821; organism=Citrus clementina; type=EST; length=248bp
GCACGAGGCACTGCCACTCACAAGACTGTTGATGGACCATCAATGAACGA
CTGGAGAGGTGGCAGAGCTGCTTCCTTCGACCTCATTCCCAGCAGCACCG
GTGCTGCCAAGGCAGTTGGTAAGGTTTTGCCTGCCCTTGCTGGTACATTG
ACCGGACTGTCCTTCCCAGTTCCTACCGGTGATGTCTCAATGGTCAACCT
CCCTGTCCGACTTGAAAAGGAGACGACTTATGAGGAACTTAAAAATGC
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