FC876836

Overview
NameFC876836
Unique NameFC876836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 55/150 (36.67%), Postives = 74/150 (49.33%), Query Frame = -1
Query:  321 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW-EKIGAEVD---MTASYGLSLFKTVPL 752
            + + D  NLPYL   +KET           P  + E C +  Y IP+   IMVNAW + RD K W +P  F PERF    +      F  IPFG GRR CPG  +A + I+  + + +Q  +W    G  VD   +   +GL+L K  PL
Sbjct:  330 VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPL 479          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = -1
Query:  297 DLVNLPYLCCVIKETXXXXXXXXXXXP-HFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERFEGIHSERE------GFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGAE-VDMTASYGLSLFKTVPLVAMCSPRQ 740
            D+  + YL  V+KE                S  +  + GYH+P GTT MVN WA+ RD  VW++P +F PERF     + E        +  PFG GRRACPG  +   T++F + SL+  FEW     + VD+T    LS     PL     PR+
Sbjct:  367 DVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPLTVKVRPRR 522          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = -1
Query:  387 DLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE 740
            DL  +P+L  VIKET           P  +  +  V GY IP    I+VNAWA+ RD K+W +P +FKPERF    +    + F+ +PFG GRR CPG AM + T+   L +L+  F+W+
Sbjct:  349 DLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWK 468          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = -1
Query:  303 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCSP 752
            +++ D+  + YL  VIKE            PH S+E+  +  YHIP GT +M+NAWA+ R+   W  +  +FKPER     +    + F+ +PFG GRR CP  + A+      L +L+  F+W    E    + D+  S G S+ +  PL A+ SP
Sbjct:  331 VSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAVASP 487          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 54/146 (36.99%), Postives = 78/146 (53.42%), Query Frame = -1
Query:  306 YLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERFEGIHSEREG--FKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEW----EKIGAEVDMTASYGLSLFKTVPLVAMCS 722
            YL  VIKE            P   SE+  + GY+IP GT ++VNAWA+ RD+  W  +  +FKPER    + + +G  FK IPFG G+R CPG       I   L ++++ F W    E    + D+T + GL +F+  PL+A+ S
Sbjct:  350 YLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIPS 495          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAMCS 752
            + + ++ N+ YL  VIKE            P   SE+  V GY+I  GT +++NAWA+ RD+ +W  +  +FKPER    G+    +   +IPFG GRR CPG  +A+      + +L+  F+W       G + D+T + G+ + +  PL+A  S
Sbjct:  339 IKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPLIAFPS 494          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 50/158 (31.65%), Postives = 85/158 (53.80%), Query Frame = -1
Query:  300 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF--EGIHS-EREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAMCSPR 752
            + + D+  L YL C +KET            H ++E+  + G+ IP+ + +M+NA+A+ RD   W +P+ F+P RF   G+   +   F+ IPFG GRR+CPG  + +  +  A+  ++ CF W+       +E+DM   +GL+  K   L A+ + R
Sbjct:  359 VEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPTTR 515          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = -1
Query:  306 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF--EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWE----KIGAEVDMTASYGLSLFKTVPLVAMCS 752
            + + ++ N+ YL  VIKE            P   +E+  V GY I  GT +++NAW++HRD  +W  +  +FKPER     +    +  K+IPFG GRR CPG  +A+  +   L +L+  F+W       G + D+   +GL + +  PL+A  S
Sbjct:  339 IKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIAFPS 494          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18
Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = -1
Query:  393 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVWEEPNKFKPERF----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFE 752
            + + D   LPYL  V+KET           PH +  +  +GG+ IP  + I+VNAW +  +   W+ P +F+PERF      + +    F+++PFG+GRR+CPG  +A+  +   LG L+Q FE
Sbjct:  346 ITEPDTYKLPYLNAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of FC876836 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18
Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = -1
Query:  318 LNDVDLVNLPYLCCVIKETXXXXXXXXXXXPHFSSENCIVGGYHIPRGTTIMVNAWAMHRDSKVW-EEPNKFKPERF----EGIHSEREGFKHIPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIGA----EVDMTASYGLSLFKTVPLV 752
            +++ D+ NLPYL  VIKE+              +  +  +GGY IP  T I VNAWA+ RD+  W + PN+F PERF    +G+  + + F+ +PFG GRR CP   + I  +     +L+  F+W         ++ M    GL++ K   LV
Sbjct:  339 VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLV 492          
The following BLAST results are available for this feature:
BLAST of FC876836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
C80B1_ESCCA2.787e-1836.67(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C78A3_SOYBN2.787e-1835.90Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71BH_ARATH2.787e-1840.83Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH2.787e-1833.76Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH2.787e-1836.99Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH2.787e-1832.69Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH3.641e-1831.65Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71AI_ARATH3.641e-1832.69Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
TCMO_POPTM4.755e-1835.48Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C83B1_ARATH4.755e-1833.77Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BA08RM1 EHR Citrus clementina cDNA clone KN0AAN3BA08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876836 ID=FC876836; Name=FC876836; organism=Citrus clementina; type=EST; length=755bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTACATAATTTTGCAGTTGGCAAT
GACTGTTGAAATCAAACCGATATTAAAAAACTACAGCAAAACCACAAAAC
AGGATTATCAAATCTAAAATTTGGTCACGCAATGCCATGGCATGAAGTGA
TCTACAGTCTCTAAAGTACTGCTCTACAAATTCCAGTAAATTTTACAACC
TTTATTGAAAGTCACCTGCAAGGTCCCCTGCAGGCCCCGAAAATTTCCAG
CGGCAAGTTTACCCTAACTGGATCTGTTCAGCATTCCAATCATATTTTGC
CGCGGACTGCACATAGCCACCAAAGGCACGGTCTTAAATAGAGATAGTCC
ATAACTTGCAGTCATGTCCACCTCCGCCCCTATCTTTTCCCACTCGAAGC
ACTGTATGAGCGAACCCAAAGCAAAAGAAATTGTACGGATAGCCATGGCT
GCACCTGGGCAAGCTCTCCTCCCCATGCCAAATGGAATATGTTTGAATCC
CTCTCTTTCACTATGAATCCCTTCAAATCTTTCAGGTTTGAACTTGTTAG
GCTCCTCCCACACCTTGGAATCCCTATGCATTGCCCAGGCATTCACCATT
ATCGTCGTGCCTCGTGGTATGTGATATCCACCCACTATGCAGTTCTCAGA
AGAAAAATGTGGCAACAGAAGTGGTGCCGGAGGATATAATCGCAGCGTCT
CTTTTATGACACAGCAAAGGTATGGAAGGTTGACAAGATCCACGTCATTT
AACAT
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