FC876852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11 Identity = 68/280 (24.29%), Postives = 125/280 (44.64%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSD-----SNETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-------NFVIKQGSKKETRVDVEEEKSEEVG---------TDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMG--IALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDA----TTQGHIADWIYAISMGLACGVFIYVAINHLIAKGF-KPQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 N+ F ++ FA GV L T +H L D S+ +D T+ +PFA +A + T+ D +F GSK+ V EEE + V T G+ R + +L + + HSV GI++G S + + +S H+ F + +G I+L M K L+ F++++P+G+GIG+ + + + A + + + G+ IY+++ L+A F P+ + +L+++ G G ++++ IW Sbjct: 82 NDIFFMVKA-FAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNVVVDEEEHAGHVHIHTHASHGHTHGSTELIRRRIVSQ--VLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMAT----FFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIW 354
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11 Identity = 70/298 (23.49%), Postives = 129/298 (43.29%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRWNESFL-------LLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK-----SYPFAFMLASAGYLLTMFGDCIINFVIK---------------QGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIAKGFK-PQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 L+++ G +P F R N SFL + FA G+ LGT MH L DS E + + +PF+ LA L+T+ D + + G + + ++E+ S N R I ++L L + HSV G+++G ++ + + H++F + +G +L+ + + +F FA+++P G+ +GIA+ Q + + + + AC G+ IY+A+ L+A F P+ + F +A L G G ++++ W Sbjct: 52 LIASMIGVGAPLFSR-NVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEENPWHKFPFSGFLAMLSGLITLAIDSMATSLYTSKNAVGIMPHGHGHGHGPANDVTLPIKEDDS------SNAQLLRYRVI--AMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQ--AEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKW 338
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A3_HUMAN (Zinc transporter ZIP3 OS=Homo sapiens GN=SLC39A3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11 Identity = 64/252 (25.40%), Postives = 113/252 (44.84%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTS-----KSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEE-EKSEEVGTD------------GNPVFFRTSSIGDTIL--------------LILALCFHSVFEGIAIGVSATKGEAWRNLWT-ISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAK 713 ++ L L F GGVFL T L E + + S YP A + G+ +T+F + +I K+ K + +D+E +VG+D G+ ++ G ++ L AL HSVFEG+A+G+ +GE +L+ +++H+ A+A+GI++ R P A + + P+G+G+G+ I+ + QG + GLA G F+++ ++AK Sbjct: 40 SKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTDYPLAETILLLGFFMTVFLEQLILTFRKE---KPSFIDLETFNAGSDVGSDSEYESPFMGGARGHALYVEPHGHGPSLSVQGLSRASPVRLLSLAFALSAHSVFEGLALGLQ-EEGEKVVSLFVGVAVHETLVAVALGISMAR--SAMPLRDAAKLAVTVSAMIPLGIGLGLGIE-SAQGVPGSVASVLLQGLAGGTFLFITFLEILAK 284
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: S39A3_BOVIN (Zinc transporter ZIP3 OS=Bos taurus GN=SLC39A3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11 Identity = 65/251 (25.90%), Postives = 111/251 (44.22%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT-----SKSYPFAFMLASAGYLLTMFGDCIINFVIKQ----------GSKKETRVDVEEEKSEEVGTDGNPVF--------------FRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWT-ISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISS--PIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAK 713 ++ L L F GGVFL T L E K++ S YP A + G+ +T+F + ++ K+ + + D E E G G+ ++ SS + L+ AL HSVFEG+A+G+ +GE +L+ +++H+ A+A+GI + R L A A +S+ P+G+ +G+ I+ + QG + + GLA G F++V ++AK Sbjct: 40 SKKILSLCNTFGGGVFLATCFNALLPAVREKLKEVLTLAHISTDYPLAETIMLLGFFMTVFLEQLVLTFRKERPAFIDLETFNASSDAGSDSEYESPFMGGPRGHALYAEPHGHSHGLSVQELSRSSPLRLLSLVFALSAHSVFEGLALGLQ-EEGEKVVSLFVGVAIHETLVAVALGINMAR----SAMALRDAAKLAVTVSAMIPLGISLGLGIE-SAQGMPSSVASVLLQGLAGGTFLFVTFFEILAK 284
BLAST of FC876852 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11 Identity = 70/275 (25.45%), Postives = 120/275 (43.64%), Query Frame = 3 Query: 90 AGGVFLGTSMMHFLSDSNETFKDLTSK--------SYPFA-FMLASAGYLLTMFGDCIINFVIKQGSKKE--------------TRVDVEE--------EKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIA-KGFKPQNKCYFDAPFFKFLAVLSGVGVIAVVMIW 812 A GV L T MH L DS F DLTSK +PFA F+ + L+ M + ++ SK+E T+ D++ EK E+V D R I +L L + HSV G+A+G S K + + H++F + +G ++L+ K T F F++++P G+ +G+AI + + + AC G+ IY+A+ +L+A + F P+ + ++A +G ++++ W Sbjct: 97 ASGVILATGFMHVLPDS---FDDLTSKCLPEDPWQKFPFATFITMISALLVLMIESFAMCAYARRTSKREGEVVPLENGSNSVDTQNDIQTLENGSSYVEKQEKVNEDKTSELLRNKVIAQ--ILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMV--FFFSVTTPFGIVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVLGYVATFTGAAGMSLMAKW 364 The following BLAST results are available for this feature:
BLAST of FC876852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876852 ID=FC876852; Name=FC876852; organism=Citrus clementina; type=EST; length=831bpback to top |