FC876863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: ZC3HF_DANRE (Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.509e-46 Identity = 103/225 (45.78%), Postives = 136/225 (60.44%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYV-----------QNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD-----KQTMEDWDQETLEKVVESKNKEYQQNK-PTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIK 670 MPPK+ + K + KK+KI+EDKTFGLKNK +K QK++ QN +Q + +++K LN+LFK V+ KV GVDPKS+LC F+K GQC KG KCKFSHDL+++RK EK +Y D RD K TME+WD++ LE+VV K+ E ++ K T I CKYFL+ ++ YGWF VCP GG C YRHALP +V+K Sbjct: 1 MPPKKPAPAAANKKTQEKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTK-----KKDDKKKELSELNELFKPVVAAQKVSKGVDPKSVLCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSLYVDGRDDELLEKDTMENWDEKKLEEVVNKKHGEAEKKKAKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPVGFVLK 219
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: TMA46_YEAST (Translation machinery-associated protein 46 OS=Saccharomyces cerevisiae GN=TMA46 PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46 Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 2 Query: 65 MPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR---DKQTMEDWDQETLEKVVESKNKEYQQNKPTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIKSH 676 MPPK+ +A+ A K+K DKTFG+KNKN+S VQKY++ ++ PK ++ ++ LF V+ +V GVDPKS++C +K G C KG KCKFSHDLNV R+ EK D+Y D R + TM++WD+E L KV+ SK+ TD CKYF+E V+ YGWF +CPNGG +C YRH+LP +V+K++ Sbjct: 1 MPPKKGKQAQAAGKKKDNVDKTFGMKNKNRSTKVQKYIKQVQSQSDPKKEEMRLKKLEEKKRREAEEAERRALFN-PVADQRVRAGVDPKSMVCALFKLGNCNKGAKCKFSHDLNVGRRMEKKDLYQDTRSEKENDTMDNWDEEKLRKVILSKHG--NPKTTTDKVCKYFIEAVENGKYGWFWICPNGGDKCMYRHSLPEGFVLKTN 204
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.289e-44 Identity = 99/209 (47.37%), Postives = 126/209 (60.29%), Query Frame = 2 Query: 62 KMPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDK-QTMEDWDQETLEKVVESKNKEYQQNKPTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIK 670 K PP K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P+ D K L +FK +Q KV G DPKS++C F+K G C KG KCKFSHDL+ + K EK IY D RD+ M +WD L++VVE K+ +Q TDI CK+FLE V+K YGWF CPNGG +C YRHALP YV+K Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLSQENKVEKRSIYVDMRDEDDPMTNWDDAKLKEVVEKKSSGEKQRPTTDIICKFFLEAVEKSKYGWFWECPNGG-KCIYRHALPAGYVLK 208
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43 Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 2 Query: 65 MPPKQQS---KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR----DKQTMEDWDQETLEKVVESKNKEYQQNKPTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIKSHMTAL 688 MPPKQQ K+E +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+D R D++T E+WD + L +VV KNK DI CKYFLE V+ YGWF CPNGG +C YRH LP YV+K A+ Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVNKKNKNKHM---IDIVCKYFLEAVENNKYGWFWECPNGGEKCQYRHCLPEGYVLKKERKAM 211
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.089e-43 Identity = 93/211 (44.08%), Postives = 126/211 (59.72%), Query Frame = 2 Query: 65 MPPKQ-----QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKI--AVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKQ--TMEDWDQETLEKVVESKNKEYQQNKPTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIK 670 MPPK+ K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ + L ++ I V KV G DPKS++C F+K G C KG KCKFSHDL+++ K EK +Y D RD + M +WD L++VV+ K+ E ++ T+I CK+FLE V+K YGWF CPNG +C YRHALPP YV+K Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFKPVQTQKVDKGTDPKSVVCAFFKQGLCTKGDKCKFSHDLSLENKVEKRSMYVDMRDNEDDLMTNWDDAKLKEVVDKKHSEEKRRPTTEIICKFFLEAVEKSKYGWFWECPNGE-KCIYRHALPPGYVLK 209
BLAST of FC876863 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40 Identity = 94/222 (42.34%), Postives = 123/222 (55.41%), Query Frame = 2 Query: 65 MPPKQ--QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKQTMEDWDQETLEKVVESKNKEYQ------------QNKPTDIDCKYFLEPVDKKHYGWF*VCPNGGIECHYRHALPPEYVIKSHMTAL 688 MPPKQ KAE +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+DK T E+WD+E L++VV KNK K + CKYFLE V+ YGWF CPNGG +C YRH LP YV+K A+ Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADK----TNENWDKEKLDEVVNKKNKGGHVIDIVRDFLMIFALKNQEKVCKYFLEAVENNKYGWFWECPNGGDKCQYRHCLPEGYVLKKDRKAM 217 The following BLAST results are available for this feature:
BLAST of FC876863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876863 ID=FC876863; Name=FC876863; organism=Citrus clementina; type=EST; length=690bpback to top |