FC876904

Overview
NameFC876904
Unique NameFC876904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length817
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.717e-72
Identity = 130/253 (51.38%), Postives = 172/253 (67.98%), Query Frame = 1
Query:   52 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKP 810
            MS TAGQVI CKAAVAW A  PL IE ++VAPP+ +EVR+KIL+T++CHTD Y  +      LFP + GHE  GIVESVGEGVT   PGDHV+P++  +CKEC +C + ++N+C  +RI+   G M  DG SRF+  GK ++HF+G STFSEYTV     + K+NP APL+KV +L CGISTG+GA +N  K ++G TVA++             + +GA +I+G+DL  SKF  AK FG TE +NPK  + P
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELP 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 269.24 bits (687), Expect = 1.899e-71
Identity = 130/249 (52.21%), Postives = 170/249 (68.27%), Query Frame = 1
Query:   52 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKD 798
            MS T G+VI CKAAVAWEA KPLVIE++EVAPP+ +EVR+KI  T +CHTD +         LFP + GHE  GIVESVGEGVT+ + GDHV+ ++  +C EC  C S ++N+C  +R+    GVM  +G SR S KG+ ++HF+GTSTF+EYTV     + KIN  APL+KVC+L CGISTG+GA +N AK + G T A++             + +GA +I G+D+NP KF  AKKFG T+FVNPKD
Sbjct:    1 MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVM-PEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKD 248          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.099e-70
Identity = 129/252 (51.19%), Postives = 172/252 (68.25%), Query Frame = 1
Query:   58 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            GTAG+VI+CKAA+AWE  KPL IE++EVAPP+ +EVR+KIL T +C +D +      + PL P + GHEA G+VESVGEGVT ++PGD V+P+F  +C +C  C S   N+C    ++   G+M  DG SRF+ KGK ++HF+ TS+F+EYTV H   V KI+ AAPL+KVC++ CG STG+GA V  AK + G T A+F             + +GASRIIGVD+N  KF +AK+ G TE VNP DY KP+
Sbjct:    1 GTAGKVIKCKAAIAWEIKKPLSIEQIEVAPPKAHEVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLM-PDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKPI 250          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 265.388 bits (677), Expect = 2.742e-70
Identity = 131/252 (51.98%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV W+  KP  IEEVEVAPP+ +EVR+K++ T +C +D +        PL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   ESN C +  +   +G+++ DG SRF+ KGKPI+HF+GTSTFS+YTV     VAKI+ AAPL+KVC++ CG STG+G+ V VAK   G T A+F             + +GASRII VD+N  KF +AK+ G TE +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHAVTGSIAVPL-PVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKGMLL-DGTSRFTCKGKPIHHFIGTSTFSQYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFPKAKEVGATECINPQDYKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.742e-70
Identity = 127/251 (50.60%), Postives = 173/251 (68.92%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            TAG+VI+CKAA+AWE  KPL IE++EVAPP+ +EVR+KIL T +C +D +      + PL P + GHEA G+VESVGEGVT ++PGD V+P+F  +C +C  C S + N+C    +N+  G+M  DG SRF+ KGK I+HF+ TSTF+EYTV H   V KI+P+APL+KVC++ CG STG+GA +  AK + G   A+F             + +GASRIIGVD+N  KF +AK+ G TE +NP D+ KP+
Sbjct:    2 TAGKVIKCKAAIAWELNKPLSIEQIEVAPPKAHEVRIKILATGVCRSDEHVISGAFRMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLM-PDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKPI 250          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.108e-70
Identity = 130/251 (51.79%), Postives = 167/251 (66.53%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            T G+VI+CKAAVAWEA KPLVIEE+EV  P  NE+R+KI+ T +CHTD+Y          FP + GHE  GIVESVG GVT+ QPG+ V+P+F  +C EC  C S ++N C     N    VM +  ++RF+ KG+ +  F+GTSTFS+YTV +   VAKI+P+APLD VC+L CG+STGFGA VN AK + G T A+F               +GA RII VDLNP KF +AK FG T+FVNP D+ +P+
Sbjct:    2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPI 251          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 6.108e-70
Identity = 133/252 (52.78%), Postives = 174/252 (69.05%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++ T +C +D +       TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++  RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG+G+ V VAK  +G T A+F             + +GA+RIIGVD+N  KF +AK+ G TE VNP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 264.233 bits (674), Expect = 6.108e-70
Identity = 131/252 (51.98%), Postives = 171/252 (67.86%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG STG+G+ VNVAK   G T A+F             + +GA+RII VD+N  KF +AK+ G TE +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 7.977e-70
Identity = 128/256 (50.00%), Postives = 178/256 (69.53%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLL-RINT---DRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            T G+VI+CKAA+AWEAGKPL +EE+EV+PP+ +EVR+KI+ T +C TD +      +  +FP I GHE  GIVES+G+GV+  +PGD V+P++  +C  C  C + ++N+C+ + +I T   D+ VM +DG SRF+ KGKPIYHF+GTSTFSEYTV     +AKI+ AAPLDKVC++ CG STG+GA +N A+ + G T A+F             + +GAS+I G+D+N  KF  AKK G T+ +NP+D  KPVQ
Sbjct:    2 TEGKVIKCKAAIAWEAGKPLSVEEIEVSPPKDHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKVIPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVM-SDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFGIDINKDKFPLAKKLGATDCLNPQDIRKPVQ 256          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 7.977e-70
Identity = 132/251 (52.59%), Postives = 170/251 (67.73%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+KIL T +C +D +        P FP I GHEA G+VESVGEGVT ++PGD V+P+F  +C EC  C S + N+C    I +  G+M  DG +RF+ KGK I+HF+GTSTF+EYTV H   VAKI  AAPL+KVC++ CG STG+GA V  AK + G T A+F             + +GASRII +D+N  KF +AK+ G T+ VNPKD+ KP+
Sbjct:    3 TAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRIKILATGICRSDDHVITGALVRP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSACLSTKGNLCSKNDIGSASGLM-PDGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAVAKIAAAAPLEKVCLIGCGFSTGYGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPI 251          
The following BLAST results are available for this feature:
BLAST of FC876904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
ADHX_CAEEL1.717e-7251.38Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHX_DROME1.899e-7152.21Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH1A_UROHA2.099e-7051.19Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH1_RABIT2.742e-7051.98Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH1_NAJNA2.742e-7050.60Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_GADCA6.108e-7051.79Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADH1E_HORSE6.108e-7052.78Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1B_PANTR6.108e-7051.98Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH4_STRCA7.977e-7050.00Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1_APTAU7.977e-7052.59Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BE10RM1 EHR Citrus clementina cDNA clone KN0AAN3BE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876904 ID=FC876904; Name=FC876904; organism=Citrus clementina; type=EST; length=817bp
GCACGAGGGCTAATTTTACAGGTGTTGAGAGTATCATCATTCATCATCAA
TATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCAT
GGGAGGCGGGGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCA
CAGAAAAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATAC
TGATGTTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCA
TTTTTGGTCATGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTA
ACTGATCTCCAACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTG
CAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCC
TCCGGATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGG
TTCTCGATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTT
CAGTGAATACACTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTG
CTGCCCCTCTTGACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGT
TTTGGGGCTACTGTTAATGTTGCCAAACCGAAGAAGGGCCAGACTGTTGC
CATTTTTGGATTGGGTGCAGTTGGCCTTGCTGCTGCCGAAGGGGCAAGAG
TATCAGGGGCTTCCAGGATCATTGGTGTTGATTTGAACCCAAGCAAATTC
AATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAAGATTA
TGACAAACCTGTTCAAC
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