FC876904

Overview
NameFC876904
Unique NameFC876904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length817
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.566e-68
Identity = 126/251 (50.20%), Postives = 169/251 (67.33%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            T G+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G++ESVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HFVGTSTF+EYTV H    AKI+ AAPL+KVC++ CG STG+GA +  AK + G T A+F             + +GASRII VD+N  KF +AK+ G TE +NPKD+ KP+
Sbjct:    3 TVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVGLSVVMGCKAAGASRIIAVDINKDKFAKAKELGATECINPKDFKKPI 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 4.377e-68
Identity = 129/252 (51.19%), Postives = 168/252 (66.67%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++   +C +D +       TPL P I GHEA GIVE VGEGVT ++PGD V+P+FT +C +C  C + ESN C    ++  RG M  DG  RF+  GKPI+HF+G STFS+YTV     VAKI+ A+PL+KVC++ CG STG+G  V VAK   G T A+F             + +GA+RII VD+N  KF +AK+ G TE +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEEVEVAPPKAHEVRIKMVAVGICRSDDHVVSGTLVTPL-PAILGHEAAGIVEGVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCFKNDLSNPRGTM-QDGTRRFTCGGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 4.377e-68
Identity = 129/252 (51.19%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+   +C +C  C + ESN C    ++  +G +  DG SRF+ +GKPI+HF+G STFS+YTV     VAKI+ A+PL KVC++ CG STG+G+ VNVAK   G T A+F             + +GA+RII VD+N  KF +AK+ G TE +NP+DY+KP+Q
Sbjct:    3 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAQEVRIKMVAVGICGTDDHVVSGTMVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLAVPQCGKCRICKNPESNYCLKNDVSNPQGTL-QDGTSRFTCRGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYNKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 256.144 bits (653), Expect = 1.663e-67
Identity = 125/252 (49.60%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IE++EVAPP+ +EVR+K++ T +C +D +       TPL P + GHE  GIVES+GEGVT ++PGD V+P+F+ +C +C  C   ESN+C   +  T     + DG SRFS +GKPI+HF+ TSTFS+YTV     VAKI+ AAPLDKVC++ CG STG+G+ V VAK   G T A+F             + +GA++II VD+N  KF +AK+ G T+ +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCINPQDYTKPIQ 253          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.837e-67
Identity = 125/252 (49.60%), Postives = 166/252 (65.87%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            T GQVIRCKAA+ W+ G P  IEEVEVAPP+  EVR+K++ T LC T++    +K    L+P I GHE  GIVES+GEGV+ ++PGD V+ +F  +C EC  C + E N C  ++    +  +++DG SRF+ KGK IYHF  TSTF EYTV     VAKI+  APL+KVC++SCG STGFGA +N AK   G T A+F             + +GA+RIIGVD+N  KF +A++ G TE +NP+D  KP+Q
Sbjct:    3 TTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFC--IQFKQSKTQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.706e-67
Identity = 125/252 (49.60%), Postives = 165/252 (65.48%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            T GQVIRCKAA+ W+ G P  IEEVEVAPP+  EVR+K++ T LC T++    +K    L+P I GHE  GIVES+GEGV+ ++PGD V+ +F  +C EC  C + E N C  ++       +++DG SRF+ KGK IYHF  TSTF EYTV     VAKI+  APL+KVC++SCG STGFGA +N AK   G T A+F             + +GA+RIIGVD+N  KF +A++ G TE +NP+D  KP+Q
Sbjct:    3 TTGQVIRCKAAILWKPGAPFSIEEVEVAPPKAKEVRIKVVATGLCGTEMKVLGSKHLDLLYPTILGHEGAGIVESIGEGVSTVKPGDKVITLFLPQCGECTSCLNSEGNFC--IQFKQSETQLMSDGTSRFTCKGKSIYHFGNTSTFCEYTVIKEISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQDLKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.706e-67
Identity = 129/251 (51.39%), Postives = 168/251 (66.93%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            TAG+VI+CKAAV W   +PL IEE+EVAPP+++EVR+KI+ T +C +D +          FP I GHEA G+VESVGEGVT  +PGD V+P+F  +C EC  C + ESN+C    I    GV++ D  SRF+ KGK I++F+ TSTF+EYTV     VAKI+  APL+KVC++ CG STG+G+ VN  K K G T A+F             +V+GASRIIGVDLN  KF  AK+ G TE +NPKDY+ P+
Sbjct:    2 TAGKVIKCKAAVCWGPKQPLSIEEIEVAPPKRHEVRVKIVATGICRSDDHVISGALSDMKFPVILGHEAAGVVESVGEGVTKFKPGDKVIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLL-DKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPI 251          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.706e-67
Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IE++EVAPP+ +EVR+K++ T +C +D +       TPL P + GHE  GIVESVGEGVT ++PGD V+P+F+ +C EC  C   ESN C    +   RG +  +G SRFS KGK I++F+ TSTFS+YTV     VAKI+ A+PLDKVC++ CG STG+G+ V VAK   G T A+F             + +GA+RII VD+N  KF +AK+ G TE +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWELHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSGTLVTPL-PAVLGHEGAGIVESVGEGVTCVKPGDKVIPLFSPQCGECRICKHPESNFCSRSDLLMPRGTL-REGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.706e-67
Identity = 128/252 (50.79%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPVQ 816
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+   +C +C  C + ESN C    ++  +G +  DG SRF+ + KPI+HF+G STFS+YTV     VAKI+ A+PL+KVC++ CG STG+G+ VNVAK   G T A+F             + +GA+RII VD+N  KF +AK+ G TE +NP+DY KP+Q
Sbjct:    3 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTL-QDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQ 252          
BLAST of FC876904 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 254.603 bits (649), Expect = 4.840e-67
Identity = 127/251 (50.60%), Postives = 168/251 (66.93%), Query Frame = 1
Query:   61 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSKFNEAKKFGVTEFVNPKDYDKPV 813
            TAG+VI+C+AAV WE  KP  IEEVEVAPP+  EVR+KI+ T +C +D +       TPL P I GHEAGGIVES+GEGVT ++PGD V+P+F  +C +C  C   ESN+C    +   +G ++ DG SRF+ KGKPI+HF+G +TFSEYTV     V KI+ A+PL+KVC++ CG STG+G+ V V K  +G   A               + +GA+RII VD+N  KF +AK+ G TE VNP+DYDKP+
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPI 251          
The following BLAST results are available for this feature:
BLAST of FC876904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
ADH1_CHICK2.566e-6850.20Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH1G_PAPHA4.377e-6851.19Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH1A_PONAB4.377e-6851.19Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
ADH1_RAT1.663e-6749.60Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH6_HUMAN2.837e-6749.60Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADH6_PONAB3.706e-6749.60Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH1_RANPE3.706e-6751.39Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1_MOUSE3.706e-6750.40Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1A_HUMAN3.706e-6750.79Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADH1_GEOAT4.840e-6750.60Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BE10RM1 EHR Citrus clementina cDNA clone KN0AAN3BE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876904 ID=FC876904; Name=FC876904; organism=Citrus clementina; type=EST; length=817bp
GCACGAGGGCTAATTTTACAGGTGTTGAGAGTATCATCATTCATCATCAA
TATGTCTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCAT
GGGAGGCGGGGAAGCCACTAGTGATTGAAGAAGTGGAGGTGGCTCCACCA
CAGAAAAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATAC
TGATGTTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCA
TTTTTGGTCATGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTA
ACTGATCTCCAACCAGGAGACCATGTTCTTCCTGTATTCACAGGAGAGTG
CAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCC
TCCGGATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCAAGG
TTCTCGATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTT
CAGTGAATACACTGTTACCCACGTCGGTTGTGTTGCTAAGATCAATCCTG
CTGCCCCTCTTGACAAAGTTTGTGTACTCAGCTGCGGAATCTCCACAGGT
TTTGGGGCTACTGTTAATGTTGCCAAACCGAAGAAGGGCCAGACTGTTGC
CATTTTTGGATTGGGTGCAGTTGGCCTTGCTGCTGCCGAAGGGGCAAGAG
TATCAGGGGCTTCCAGGATCATTGGTGTTGATTTGAACCCAAGCAAATTC
AATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAAGATTA
TGACAAACCTGTTCAAC
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