FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 58/158 (36.71%), Postives = 82/158 (51.90%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNI-QVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +  D  V+ +  A+E VGG  L+TADHGNAE M           +D +  Q  T+HT  PVP+   G       K    +  G L+++A T +   G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAITSGKYDTIICNYPNGDMVGHTGVMEAAVKAVETLDHCVEQVAKAVESVGGQLLITADHGNAEQM-----------RDPSTGQAHTAHTNLPVPLIYVGE------KSLKAVEGGKLSDIAPTMLTLMGMEIPKEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_VIBHB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ E+   AI S ++  +  N PN+DMVGHTG  EA   A +A DE+V  +++AI++V G  L+TADHGNAE M+     G          V T+HT  PVP+   G      V+F+     G L+++A T ++  G E P++
Sbjct:  370 PEMSSPELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEQAIEALDESVGKVVEAIKEVSGQMLITADHGNAEMMIDPETGG----------VHTAHTNLPVPLIYVG---DKAVEFK---EGGKLSDLAPTMLSLAGLEIPAE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHIDS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA V A +A D  V  +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVDEVAKAVESVGGQLLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGD------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHESR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T ++  G   P++
Sbjct:  372 PEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T ++  G   P++
Sbjct:  372 PEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHESA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain ANA-3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T ++  G   P++
Sbjct:  372 PEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRDATID-------EGGKLSDVAPTILHLMGETIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS185) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T +   G   P++
Sbjct:  372 PEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRNATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  ++DA+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T +   G   P++
Sbjct:  372 PEMSSAELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRNATID-------EGGKLSDVAPTILTLIGEAIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. tomato GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 58/150 (38.67%), Postives = 78/150 (52.00%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINFHGYEAPSD 735
            P+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I DA+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G       K +  +  GG LA+VA T +   G E P +
Sbjct:  368 PEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGIMEAAIKAVEYLDVCVGRITDALEKVGGEALITADHGNVEQMT----------DDATGQAHTAHTSEPVPFVYVG-------KRQLKVREGGVLADVAPTMLQLLGMEKPQE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_METMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methanosarcina mazei GN=gpmI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = -3
Query:  316 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFIN 735
            P+M A E+ +   K ILS ++  + +N  N DMVGHTGD EA V A +  D  V  I++A+   GG  L+TADHGNAE M + +  GEP          T+HT  PV     G G   +VK    L NG L+++A T ++
Sbjct:  379 PEMSAYEVTDEVVKRILSGKYDVIILNFANMDMVGHTGDFEAAVKAVETVDNCVGRIVEALRTAGGAALITADHGNAEQM-ENSHTGEP---------HTAHTSNPVKCIYTGNG---EVK---ALENGKLSDLAPTLLD 502          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_ENT381.013e-1736.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBHB1.323e-1737.582,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHIDS1.323e-1737.582,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESR1.323e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESM1.323e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESA1.323e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB81.323e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB51.323e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSESM1.323e-1738.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_METMA1.323e-1740.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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