FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SALTY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhimurium GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SALPB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SALPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi A GN=gpmI PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSEU2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gpmI PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGG-LANVAATFINFHGYEAPSD 735
            P+M A E+ ++   AI  +R+  + VN  N DMVGH+G +EA + A +  D  V  I +A+EKVGG  L+TADHGN E M            D   Q  T+HT +PVP    G       K +  +  GG LA+VA T ++  G E P +
Sbjct:  368 PEMSAPEVTDKIVDAIEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEALEKVGGEALITADHGNVEQMT----------DDSTGQAHTAHTSEPVPFVYVG-------KRQLKVRQGGVLADVAPTMLHLLGMEKPQE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI1_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Methanosarcina acetivorans GN=gpmI1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A +I +   + I S ++  + +N  N DMVGHTG  EA V A +A D+ +  I++A++++GG+ L+TADHGNAE M+  +K GEP          T+HT  PV     G G   +VK    L  G L ++A T +   G   P +
Sbjct:  373 PEMSAYKITDEVVRRIQSGKYDVIVLNFANMDMVGHTGIFEAAVKAVEAVDKCIGRIVEALKEIGGVALITADHGNAEQMID-SKTGEP---------HTAHTSNPVRCIYFGNG---EVK---ALKKGKLCDLAPTLLELIGIPKPQE 505          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHEON (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella oneidensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGHTG+ +A V AC+A D  +  +++A+ KVGG  ++TADHGNAE M            +   Q  T+HT + VP    G     D         G L++VA T ++  G   P++
Sbjct:  372 PEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVGGECIITADHGNAEQMT----------DETTGQAHTAHTSELVPFVFVGRDATID-------KGGKLSDVAPTILHLMGESIPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SILPO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Silicibacter pomeroyi GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.947e-17
Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIA-IGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ ++  +AI    +  +  N  N DMVGHTGD++A + AC+A D+ +  +I A+E+ GG  +VTADHGN E M+     G            T+HT  PVP+A +GGP           L +G L+++A T +   G   P +
Sbjct:  366 PEMSAPEVTDKFVEAI-GAGYDLIVTNYANPDMVGHTGDLKAAIKACEAVDQGLSRVIAALEQAGGAMIVTADHGNCEMMIDPETGGPH----------TAHTLNPVPVALVGGPA-------GVTLRDGRLSDLAPTVLALMGLPKPPE 497          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SALTI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhi GN=gpmI PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.947e-17
Identity = 57/157 (36.31%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  ++ +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIEQVTKAVESVGGQLLITADHGNAEQM------RDP----ATGQEHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SALCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella choleraesuis GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.947e-17
Identity = 57/157 (36.31%), Postives = 82/157 (52.23%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDY--EPSFI 735
            P+M + E+ E+   AI S ++  +  N PN DMVGHTG +EA + A +A D  +  +  A+E VGG  L+TADHGNAE M       +P       Q  T+HT  PVP+   G       K    +  G L+++A T ++  G E P +   +P FI
Sbjct:  372 PEMSSAELTEKLVAAIESGKYDTIICNYPNGDMVGHTGVMEAAIKAVEALDNCIDQVTKAVESVGGQLLITADHGNAEQM------RDP----ATGQAHTAHTNLPVPLIYVGE------KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFI 512          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_THERP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.849e-17
Identity = 57/151 (37.75%), Postives = 77/151 (50.99%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPD--DVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ + A +AI+S+R+  V VN  N DMVGHTG   A V A +  D  +  I  A+  V G  +VTADHGNA++M+            G  +V T+HT  PVP  +  P       V  RT    G LA+VA T +   G   P +
Sbjct:  373 PEMSAPEVTDAAVQAIVSQRYAFVLVNYANPDMVGHTGVFAAAVAAVECVDRCLGRIEQAVRSVNGYLVVTADHGNADEML----------VPGTNEVWTAHTKNPVPFILVAPNHSPFRSVALRT---GGRLADVAPTILEIMGLPQPEE 510          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_SALTY1.728e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALPB1.728e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALPA1.728e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEU21.728e-1738.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI1_METAC1.728e-1736.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEON2.256e-1734.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SILPO2.947e-1735.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTI2.947e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALCH2.947e-1736.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THERP3.849e-1737.752,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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