FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_HAHCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Hahella chejuensis (strain KCTC 2396) GN=gpmI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ ++  +AI S +F  +  N  N DMVGH+G  +A + A +  D+ +K I +A+ +VGG  L+TADHGNAE MV           D N Q  T HT  PVP+   G   P ++  + D   G L ++A + ++    E P +
Sbjct:  373 PEMSAPEVTDKLVEAIKSGKFDLIVCNYANGDMVGHSGVYDAAMKAAECIDQCLKRIAEALNEVGGQCLITADHGNAEQMV-----------DENGQPHTQHTTGPVPLIYIG---PKNISLKED---GRLCDIAPSLLDLMELEKPRE 504          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_GLUOX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gluconobacter oxydans GN=gpmI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = -3
Query:  295 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAP 735
            P+M A E+ ++A  AI S +F  + +N  N DMVGHTG + A + AC+  D+ +  I DAI K GG+ LVTADHGN E M       +P+    +    TSHT   VP+ +         +  T + +G LA++A T +   G + P
Sbjct:  369 PEMSAPELTDKAVAAIESGKFDMIVLNFANPDMVGHTGSLSAAIKACETVDQGLGRINDAIVKAGGVLLVTADHGNCETM------RDPVTGGAH----TSHTLNVVPVILA------HARGET-IHDGRLADLAPTMLALMGVKQP 498          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ E   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI + GGI ++TADHGNA+         E L  +G  Q  T+HT  PVP+ +   G    ++ R D   G L ++A T ++  G   P +
Sbjct:  372 PEMSAYEVTEALLKEIAADKYDAIILNYANPDMVGHSGMLEPTIKAVEAVDECLGKVVDAILEKGGIAIITADHGNAD---------EVLTPEGKPQ--TAHTTNPVPVIVTKHG----IELRKD---GILGDLAPTMLDLLGLPQPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSEF5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16
Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ ++   AI  +R+  + VN  N DMVGH+G  EA V A +  D  V  I+DA+EKVGG  L+TADHGN E M            +   Q  T+HT +PVP    G      +K R     G LA+VA T +   G   P++
Sbjct:  369 PEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGVFEAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQM----------SDESTGQAHTAHTTEPVPFIYVGKRA---LKVR---EGGVLADVAPTMLKLLGLPKPAE 501          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEGPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Legionella pneumophila (strain Paris) GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +    AI SR +H +  N  N+DMVGHTG+ EATV A +  D+ ++ +  A++  GG  L+TADHGNAE+M          F +   Q  T+HT +PVP    G G      +      G L ++A + +   G   P +
Sbjct:  368 PEMSAHELTKTLIAAINSRDYHVIICNYANADMVGHTGNFEATVQAIECLDQCMQQVWQALKNNGGKLLITADHGNAEEM----------FSEATNQAHTAHTSEPVPFLYVGGG------WHFTHSEGSLIDIAPSLLALLGITPPPE 500          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHEFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKD-GNIQVLTSHTFKPVP-IAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++   AI S ++  +  N PN DMVGH+G+ +A V AC+A D  +  +++A+ KV G  L+TADHGNAE M           KD  N Q  T+HT   VP + +G   +  D         G L+++A T +   G   P +
Sbjct:  371 PEMSSTELTDKLVAAIESTKYDVIICNYPNGDMVGHSGNFDAAVKACEAVDACIGRVVEALAKVDGECLITADHGNAEKM-----------KDPSNGQAFTAHTSNLVPFVYVGRDAVIKD--------GGRLSDIAPTMLTLMGQSIPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_SHEDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M + E+ ++  +AI S ++  V  N PN DMVGHTG+ +A V AC+A D  +  ++ A+ KV G  L+TADHGNAE M            +   Q  T+HT + VP    G     D   +     G L+++A T ++  G   P++
Sbjct:  372 PEMNSTELTDKLVEAIESAKYDVVICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVAALAKVNGECLITADHGNAEQMT----------DESTGQAHTAHTSELVPFIYVG----RDASIK---DGGRLSDIAPTMLSLMGQPVPAE 503          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_GLOVI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gloeobacter violaceus GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 53/155 (34.19%), Postives = 78/155 (50.32%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPI------AIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ + A  AI +R++  + +N  N DMVGHTG+ +ATV A +  D  +  +++A  + GG  L+TADHGNAE           L  D      T+HT  PVP        +  PG   DV+ R     G L ++A T +   G   P++
Sbjct:  371 PEMAAREVTDHAVAAIETRQYSLIVINYANPDMVGHTGNFDATVKAVETVDACIGRLVEACVRAGGTMLLTADHGNAE-----------LMWDEQGNPWTAHTTNPVPFILIESEGLKIPGWGTDVQLRA---GGSLGDIAPTILEILGLPQPAE 511          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++  G   P +
Sbjct:  372 PEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = -3
Query:  289 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSD 735
            P+M A E+ +   K I + ++  + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GGI ++TADHGNA+         E L  DG  Q  T+HT  PVP+ +   G    +K R     G L ++A T ++  G   P +
Sbjct:  372 PEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNAD---------EVLTPDGKPQ--TAHTTNPVPVIVTKKG----IKLR---DGGILGDLAPTMLDLLGLPQPKE 502          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
GPMI_HAHCH1.120e-1635.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLUOX1.120e-1636.732,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN1.120e-1635.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEF51.463e-1638.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEGPA1.463e-1634.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEFN1.910e-1634.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEDO1.910e-1634.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLOVI1.910e-1634.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOKA1.910e-1635.572,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST1.910e-1635.572,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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