FC877013

Overview
NameFC877013
Unique NameFC877013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length820
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 7.211e-95
Identity = 175/209 (83.73%), Postives = 188/209 (89.95%), Query Frame = 1
Query:  196 NNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            N    +   D LNWG+ AE++KGSHL+EVK+MVAE+RKPVV L G+TLT+AQVAAIA       VEL+E+AREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    5 NGKMEFCMKDPLNWGMAAESMKGSHLDEVKKMVAEFRKPVVQLAGKTLTIAQVAAIAARDDGVTVELAEAAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNTNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 213          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 7.211e-95
Identity = 177/214 (82.71%), Postives = 189/214 (88.32%), Query Frame = 1
Query:  190 CKNNNYNYSSG-----DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            C+N N    +G     D LNWG+ AE L GSHL+EVKRMVAE+RKP+V LGGETLTV+QVAAIA  S  VEL+ESAR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFG+G +SS+ LPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    3 CENKNVVLGNGLCMQKDPLNWGMAAEALTGSHLDEVKRMVAEFRKPMVQLGGETLTVSQVAAIAAGSVKVELAESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGNDSSNILPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 216          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.230e-94
Identity = 182/222 (81.98%), Postives = 190/222 (85.59%), Query Frame = 1
Query:  157 NGHQNGGLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            NG  +GG  G C          D LNWGV AE +KGSHLEEVK MV E+RKPVV LGGETLT++QVAAIA   S   VELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES HTLP SATRAAMLVR+NTLLQGYSGIRFEILEAI+K LN+NITPCLPLRGTITASGDLVPLSYIAGLLTGR NSKA
Sbjct:    9 NGVGSGGSPGFCLK--------DPLNWGVAAEAMKGSHLEEVKGMVEEFRKPVVRLGGETLTISQVAAIAVRGSEVAVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPQSATRAAMLVRINTLLQGYSGIRFEILEAISKFLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKA 222          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.674e-94
Identity = 177/225 (78.67%), Postives = 192/225 (85.33%), Query Frame = 1
Query:  148 TTENGHQNGGLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            T  N +++  L     NNN   +  D LNWGV AE +KGSHL+EVKRMVAEYRKPVV LGGETLT++QVAAIA       V+LSESAR+GVKASS+WVMESMNKGTDSYGVTTGFGATSH RTK GGALQKELIRFLNAGIFGNGTES+HTLP +ATRAAMLVR+NTLLQGYSGI FEILEAITK LN  +TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    9 TKNNANESFCLIHAKNNNNMKVNEADPLNWGVAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDHGVQVDLSESARDGVKASSEWVMESMNKGTDSYGVTTGFGATSHSRTKQGGALQKELIRFLNAGIFGNGTESNHTLPKTATRAAMLVRINTLLQGYSGIDFEILEAITKPLNKTVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 233          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.674e-94
Identity = 181/226 (80.09%), Postives = 191/226 (84.51%), Query Frame = 1
Query:  151 TENGHQNGGLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT---SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTES-SHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            T NGH NG    LC          D LNWGV AE L GSHL+EVKRMVAEYRKPVV L GETLT++QVAAI+    S   VELSE AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFG+G E+ ++TLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    7 TTNGHANGNGLDLCMKKE------DPLNWGVAAEALTGSHLDEVKRMVAEYRKPVVKLEGETLTISQVAAISARDDSGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGAEAGNNTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 226          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.973e-94
Identity = 182/235 (77.45%), Postives = 195/235 (82.98%), Query Frame = 1
Query:  133 MEIGATTENG---HQNGGLE--GLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            ME+   T NG    +NGG    GLC          D LNW V A++LKGSHL+EVKRM+ EYR+PVV LGGE+LT+ QV AIA   S   VEL+E+AR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTK GGALQKELIRFLN+GIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILE ITK LNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    1 MELSHETCNGIKNDRNGGTSSLGLCTGT-------DPLNWTVAADSLKGSHLDEVKRMIDEYRRPVVKLGGESLTIGQVTAIAAHDSGVKVELAEAARAGVKASSDWVMDSMMKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNSGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILETITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 228          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL1_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=PAL PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.041e-93
Identity = 174/200 (87.00%), Postives = 185/200 (92.50%), Query Frame = 1
Query:  223 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            D LNW + AE+L+GSHL+EVKRMVAE+RKP V LGGETLTVAQVA IA+  ++  VELSE AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGN TES HTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGL+TGRPNSKA
Sbjct:   15 DPLNWEMAAESLRGSHLDEVKRMVAEFRKPAVKLGGETLTVAQVARIASRDNAVAVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNATESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLITGRPNSKA 214          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.360e-93
Identity = 173/202 (85.64%), Postives = 185/202 (91.58%), Query Frame = 1
Query:  223 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATS----STNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            D LNW + A++LKGSHL+EVK+MVAE+RKPVV LGGETLTVAQVAAIA      +  VELSE AR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTES HTLP S TRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHN+TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:   19 DPLNWEMAADSLKGSHLDEVKKMVAEFRKPVVKLGGETLTVAQVAAIAAKDNAKTVKVELSEGARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 220          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 1.776e-93
Identity = 173/202 (85.64%), Postives = 184/202 (91.09%), Query Frame = 1
Query:  223 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATS----STNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            D LNW + A++LKGSHL+EVK+MVAE+RKPVV LGGETLTVAQVAAIA      +  VELSE AR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAG+FGNGTES HTLP S TRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHN+TPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:   19 DPLNWEMAADSLKGSHLDEVKKMVAEFRKPVVKLGGETLTVAQVAAIAAKDNVKTVKVELSEGARAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGVFGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 220          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 342.428 bits (877), Expect = 1.776e-93
Identity = 185/237 (78.06%), Postives = 201/237 (84.81%), Query Frame = 1
Query:  133 MEI-GATTENGHQNGGLEG-LC----KNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAT 819
            MEI GA   NG   GG++  LC    K  N   ++ D LNWG  AE +KGSHL+EVKRMVAE+RKPVVNLGGETLT+ QVAAI+T  +S  VELSE+AR GV ASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG ALQKELIRFLNAGIFG+  E+SHTLPHSATRAAMLVR+NTLLQG+SGIRFEILEAIT  LN+NITP LPLRGTITASGDLVPLSYIAGLLTGRPNSKAT
Sbjct:    1 MEINGAHKSNG---GGVDAMLCGGDIKTKNMVINAEDPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELSETARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGSTKETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKAT 234          
The following BLAST results are available for this feature:
BLAST of FC877013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PAL2_LITER7.211e-9583.73Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PAL1_DAUCA7.211e-9582.71Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_CAMSI1.230e-9481.98Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PALY_MEDSA4.674e-9478.67Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PAL3_PETCR4.674e-9480.09Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PALY_CITLI7.973e-9477.45Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_IPOBA1.041e-9387.00Phenylalanine ammonia-lyase OS=Ipomoea batatas GN=... [more]
PAL3_TOBAC1.360e-9385.64Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC1.776e-9385.64Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_ARATH1.776e-9378.06Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CD12RM1 EHR Citrus clementina cDNA clone KN0AAN3CD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877013 ID=FC877013; Name=FC877013; organism=Citrus clementina; type=EST; length=820bp
GCACGAGGTAGACTTCAGAATTTCCTTTAGCTCATTCATTCTTCATCACT
CCCATTCATTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTTGGTATTTT
TTGTAATTGCAGTAACATTTACGTAAAACGATATGGAGATAGGTGCCACT
ACTGAGAATGGTCACCAGAACGGTGGCCTGGAGGGTTTGTGCAAGAATAA
CAATTACAATTACAGTTCTGGGGATGCGTTGAACTGGGGAGTGATGGCGG
AGACGTTGAAGGGGAGCCATTTGGAGGAAGTGAAGCGTATGGTGGCGGAG
TACAGGAAGCCGGTGGTCAACCTCGGTGGTGAGACGTTGACCGTAGCACA
GGTGGCTGCCATTGCCACGTCCTCTACGAATGTGGAGCTGTCGGAATCTG
CCAGGGAAGGCGTCAAGGCCAGCAGTGATTGGGTGATGGAGAGCATGAAT
AAGGGTACCGACAGTTACGGCGTTACCACTGGCTTTGGTGCCACTTCTCA
TCGGAGAACCAAGAACGGCGGTGCTCTTCAGAAGGAGCTCATTAGATTTT
TGAACGCTGGAATCTTTGGAAACGGAACAGAGTCATCTCACACGCTACCT
CACTCAGCAACAAGGGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCA
GGGCTACTCCGGCATCCGATTTGAAATCCTGGAAGCGATCACAAAGCTGC
TCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCACAATCACTGCT
TCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCG
GCCCAATTCTAAGGCCACCG
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