FC877013

Overview
NameFC877013
Unique NameFC877013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length820
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAAR (Histidine ammonia-lyase OS=Staphylococcus aureus (strain MRSA252) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEYIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQMNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAAN (Histidine ammonia-lyase OS=Staphylococcus aureus (strain N315) GN=hutH PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAAM (Histidine ammonia-lyase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAAE (Histidine ammonia-lyase OS=Staphylococcus aureus (strain Newman) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAAC (Histidine ammonia-lyase OS=Staphylococcus aureus (strain COL) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAA9 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH9) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAA8 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAA3 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain USA300) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_STAA2 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH1) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  322 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIG 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_GEOTN (Histidine ammonia-lyase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=hutH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.913e-16
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  313 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            ++ L G +LT+A+   +      V  +  + E V+ S   V +++  G   YGV TGFG  +  R  +G  L++  I  L +     G            RA +L+R N LL+GYSGIR  ++E +   LN  I P +P +G++ ASGDL PL+++A  L G
Sbjct:    1 MIVLTGHSLTIAEARRVIYDREPVAAALESMEAVRKSRAAVEQAIASGRTIYGVNTGFGKLADVRI-DGSDLEQLQINLLRSHACAVG----EPFAEEVVRAMLLLRANALLKGYSGIRPVVIERLLAFLNSGIHPIVPQQGSLGASGDLAPLAHLALALVG 157          
The following BLAST results are available for this feature:
BLAST of FC877013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
HUTH_STAAR3.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAN3.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAM3.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAE3.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAC3.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA93.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA83.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA33.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA23.913e-1633.54Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_GEOTN3.913e-1633.33Histidine ammonia-lyase OS=Geobacillus thermodenit... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CD12RM1 EHR Citrus clementina cDNA clone KN0AAN3CD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877013 ID=FC877013; Name=FC877013; organism=Citrus clementina; type=EST; length=820bp
GCACGAGGTAGACTTCAGAATTTCCTTTAGCTCATTCATTCTTCATCACT
CCCATTCATTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTTGGTATTTT
TTGTAATTGCAGTAACATTTACGTAAAACGATATGGAGATAGGTGCCACT
ACTGAGAATGGTCACCAGAACGGTGGCCTGGAGGGTTTGTGCAAGAATAA
CAATTACAATTACAGTTCTGGGGATGCGTTGAACTGGGGAGTGATGGCGG
AGACGTTGAAGGGGAGCCATTTGGAGGAAGTGAAGCGTATGGTGGCGGAG
TACAGGAAGCCGGTGGTCAACCTCGGTGGTGAGACGTTGACCGTAGCACA
GGTGGCTGCCATTGCCACGTCCTCTACGAATGTGGAGCTGTCGGAATCTG
CCAGGGAAGGCGTCAAGGCCAGCAGTGATTGGGTGATGGAGAGCATGAAT
AAGGGTACCGACAGTTACGGCGTTACCACTGGCTTTGGTGCCACTTCTCA
TCGGAGAACCAAGAACGGCGGTGCTCTTCAGAAGGAGCTCATTAGATTTT
TGAACGCTGGAATCTTTGGAAACGGAACAGAGTCATCTCACACGCTACCT
CACTCAGCAACAAGGGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCA
GGGCTACTCCGGCATCCGATTTGAAATCCTGGAAGCGATCACAAAGCTGC
TCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCACAATCACTGCT
TCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCG
GCCCAATTCTAAGGCCACCG
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