FC877013

Overview
NameFC877013
Unique NameFC877013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length820
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.838e-90
Identity = 169/201 (84.08%), Postives = 182/201 (90.55%), Query Frame = 1
Query:  223 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAT 819
            D LNWG+ A+ +KGSHL+EVK+MV EYR+PVVNLGGETLT+ QVAAI+T   S  VEL+E++R GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG ALQ ELIRFLNAGIFGN  E+ HTLP SATRAAMLVRVNTLLQGYSGIRFEILEAIT LLNHNI+P LPLRGTITASGDLVPLSYIAGLLTGRPNSKAT
Sbjct:   26 DPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAETSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNTKETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKAT 226          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL4_ARATH (Phenylalanine ammonia-lyase 4 OS=Arabidopsis thaliana GN=PAL4 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.527e-89
Identity = 171/214 (79.91%), Postives = 182/214 (85.05%), Query Frame = 1
Query:  187 LCKNNNYNYS-SGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGT-ESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            LC  NN+  + SGD LNW   AE LKGSHL+EVKRMV EYRK  V LGGETLT+ QVAA+A     + VEL+E AR GVKASS+WVMESMN+GTDSYGVTTGFGATSHRRTK GGALQ ELIRFLNAGIFG G  ++SHTLP   TRAAMLVRVNTLLQGYSGIRFEILEAITKLLNH ITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    3 LCNQNNHITAVSGDPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAVARGGGGSTVELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGPGAGDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 216          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL1_RUBID (Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=PAL1 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.722e-89
Identity = 166/218 (76.15%), Postives = 185/218 (84.86%), Query Frame = 1
Query:  169 NGGLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            NG +E  C+ +       D LNW + AE+LKGSH++E+KRMV++YRKPVV LGGETLT+ QVAAIA+      VELSE  R GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTKNGGALQ+ELIRFLNAGIFG+  +S+H LPH+ATRAAMLVR NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSK+
Sbjct:    8 NGAVESFCEGH-------DPLNWNMAAESLKGSHVDELKRMVSDYRKPVVKLGGETLTIGQVAAIASHDGGVRVELSEEKRAGVKASSDWVMDSMGKGTDSYGVTTGFGATSHRRTKNGGALQRELIRFLNAGIFGSSLDSTHKLPHTATRAAMLVRFNTLLQGYSGIRFEILEAITKFLNGNITPCLPLRGTITASGDLVPLSYIAGLLIGRPNSKS 218          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.660e-81
Identity = 158/216 (73.15%), Postives = 174/216 (80.56%), Query Frame = 1
Query:  178 LEGLCKNNNYN--YSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVK-ASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            +EG   N + N      D LNW + A++LKGSHL+EVKRMVAE+R P V +GG+TLT  +   IA      + S       + +SSDWVM SMN GTDSYGVTTGFGATSHRRTKNG ALQ+ELIRFLNAGIFG GT +SHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA
Sbjct:    1 MEGAIANGHTNDFCIKVDPLNWEMAADSLKGSHLDEVKRMVAEFRNPAVKIGGQTLTSLRSPPIAARDNASKWSSPRLPARRESSSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGHALQQELIRFLNAGIFGTGTGASHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 216          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 7.740e-81
Identity = 155/210 (73.81%), Postives = 178/210 (84.76%), Query Frame = 1
Query:  193 KNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATS--STNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            K N       D LNWG  A  L+GSHL+EVK+MV E+R+PVV L G  L ++QVAA+A    ++ VEL+ESAR GVKASSDWV+ES++KGTDSYGVTTGFGATSHRRTK GGALQKELI+FLNAGIFG+G  +S+TLP +ATRAAMLVR+NTLLQGYSGIRFEIL+AI  LLN NITPCLPLRGTITASGDLVPLSY+AG+LTGRPNSKA
Sbjct:    5 KENGLCLQGRDPLNWGAAAAELQGSHLDEVKKMVEEFRRPVVKLEGVKLKISQVAAVAFGGGASAVELAESARAGVKASSDWVLESVDKGTDSYGVTTGFGATSHRRTKQGGALQKELIKFLNAGIFGSG--NSNTLPSAATRAAMLVRINTLLQGYSGIRFEILKAIATLLNKNITPCLPLRGTITASGDLVPLSYLAGILTGRPNSKA 212          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.252e-80
Identity = 159/223 (71.30%), Postives = 176/223 (78.92%), Query Frame = 1
Query:  154 ENGHQNG-GLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS-TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            ENG  +  G+ GLC          D LNWG   E + GSHL+EVKRMVAEYR+P+V + G +L +AQVAA+A +    VEL ESARE VKASSDWVM SM  GTDSYGVTTGFGATSHRRTK GGALQ+ELIRFLNAG FG GT+  H LP  ATRAAMLVR+NTLLQGYSGIRFEILEAI KLLN N+TPCLPLRGTITASGDLVPLSYIAGL+TGR N+ A
Sbjct:    4 ENGRVSANGMSGLC----VAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDG-HVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVA 221          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.252e-80
Identity = 159/223 (71.30%), Postives = 176/223 (78.92%), Query Frame = 1
Query:  154 ENGHQNG-GLEGLCKNNNYNYSSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS-TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            ENG  +  G+ GLC          D LNWG   E + GSHL+EVKRMVAEYR+P+V + G +L +AQVAA+A +    VEL ESARE VKASSDWVM SM  GTDSYGVTTGFGATSHRRTK GGALQ+ELIRFLNAG FG GT+  H LP  ATRAAMLVR+NTLLQGYSGIRFEILEAI KLLN N+TPCLPLRGTITASGDLVPLSYIAGL+TGR N+ A
Sbjct:    4 ENGRVSANGMSGLC----VAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGASLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTDG-HVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIAKLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVA 221          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PALY_WHEAT (Phenylalanine ammonia-lyase OS=Triticum aestivum GN=PAL PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.118e-79
Identity = 158/203 (77.83%), Postives = 166/203 (81.77%), Query Frame = 1
Query:  214 SSGDALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS-TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAT 819
            S  D LNWG  AE L GSHLE VKRMV EYRKPVV + G T T+A VAA+A  S T VEL ESAR  VK SSDWVM SM  GTDSYGVTTGFGATSHRRTK GGALQ+ELIRFLNAG FG GT+  H LP +ATRAAMLVRVNTLLQGYSGIRFEILE I  LLN N+TPCLPLRGTITASGDLVPLSYIAGL+TGRPNS AT
Sbjct:    9 SRADPLNWGKAAEELSGSHLEAVKRMVEEYRKPVVTMEGAT-TIAMVAAVAAGSDTRVELDESARGRVKESSDWVMNSMMNGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNAGAFGTGTD-GHVLPAAATRAAMLVRVNTLLQGYSGIRFEILETIATLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRPNSMAT 209          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 293.893 bits (751), Expect = 7.244e-79
Identity = 151/201 (75.12%), Postives = 166/201 (82.59%), Query Frame = 1
Query:  223 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTES---SHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            D LNW V AE LKGSHLEEVK+MV +YRK  V LGGETLT+ QVAA+A+    VELSE AR GVKASSDWVMESMN+ TD+YG+TTGFG++S RRT  G ALQKELIR+LNAGIF  G E    S+TLP  ATRAAML+RVNTLLQGYSGIRFEILEAIT LLN  ITP LPLRGTITASGDLVPLSYIAG L GRPNS++
Sbjct:   13 DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVASGGPTVELSEEARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLNAGIFATGNEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLLPLRGTITASGDLVPLSYIAGFLIGRPNSRS 213          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.244e-79
Identity = 152/192 (79.17%), Postives = 165/192 (85.94%), Query Frame = 1
Query:  247 AETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNV--ELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKA 816
            A++LKGSHL+EVKRM+ EYR PVV LGGETLT+ QV AIA+    V  ELSE AR GVKAS+DWVM+S N    S+ VT GFGATSHR+TK GG LQKELIRFLN GIFGNGTES+H LP SATRAAMLVR NTLLQGYSGIRFE+LEAITKLLNHNITPCLPLRGTITASGDLVPL+YIAGLLTGR NSKA
Sbjct:    3 ADSLKGSHLDEVKRMIEEYRNPVVKLGGETLTIGQVTAIASGHVGVMVELSEEARAGVKASNDWVMDSKN----SHAVTAGFGATSHRKTKQGGELQKELIRFLNVGIFGNGTESNHILPRSATRAAMLVRTNTLLQGYSGIRFEMLEAITKLLNHNITPCLPLRGTITASGDLVPLAYIAGLLTGRHNSKA 190          
The following BLAST results are available for this feature:
BLAST of FC877013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PAL2_ARATH1.838e-9084.08Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL4_ARATH4.527e-8979.91Phenylalanine ammonia-lyase 4 OS=Arabidopsis thali... [more]
PAL1_RUBID7.722e-8976.15Phenylalanine ammonia-lyase 1 OS=Rubus idaeus GN=P... [more]
PAL2_IPOBA2.660e-8173.15Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]
PALY_BROFI7.740e-8173.81Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL2_ORYSJ2.252e-8071.30Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI2.252e-8071.30Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_WHEAT1.118e-7977.83Phenylalanine ammonia-lyase OS=Triticum aestivum G... [more]
PAL3_ARATH7.244e-7975.12Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PAL1_POPKI7.244e-7979.17Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CD12RM1 EHR Citrus clementina cDNA clone KN0AAN3CD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877013 ID=FC877013; Name=FC877013; organism=Citrus clementina; type=EST; length=820bp
GCACGAGGTAGACTTCAGAATTTCCTTTAGCTCATTCATTCTTCATCACT
CCCATTCATTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTTGGTATTTT
TTGTAATTGCAGTAACATTTACGTAAAACGATATGGAGATAGGTGCCACT
ACTGAGAATGGTCACCAGAACGGTGGCCTGGAGGGTTTGTGCAAGAATAA
CAATTACAATTACAGTTCTGGGGATGCGTTGAACTGGGGAGTGATGGCGG
AGACGTTGAAGGGGAGCCATTTGGAGGAAGTGAAGCGTATGGTGGCGGAG
TACAGGAAGCCGGTGGTCAACCTCGGTGGTGAGACGTTGACCGTAGCACA
GGTGGCTGCCATTGCCACGTCCTCTACGAATGTGGAGCTGTCGGAATCTG
CCAGGGAAGGCGTCAAGGCCAGCAGTGATTGGGTGATGGAGAGCATGAAT
AAGGGTACCGACAGTTACGGCGTTACCACTGGCTTTGGTGCCACTTCTCA
TCGGAGAACCAAGAACGGCGGTGCTCTTCAGAAGGAGCTCATTAGATTTT
TGAACGCTGGAATCTTTGGAAACGGAACAGAGTCATCTCACACGCTACCT
CACTCAGCAACAAGGGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCA
GGGCTACTCCGGCATCCGATTTGAAATCCTGGAAGCGATCACAAAGCTGC
TCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCACAATCACTGCT
TCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCG
GCCCAATTCTAAGGCCACCG
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