FC877013

Overview
NameFC877013
Unique NameFC877013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length820
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_LEGPC (Histidine ammonia-lyase OS=Legionella pneumophila (strain Corby) GN=hutH PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.181e-18
Identity = 49/154 (31.82%), Postives = 88/154 (57.14%), Query Frame = 1
Query:  337 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L++  +  I     +  L+E+A E ++AS   V + +++    YG+ TGFG+ +++   +     KEL R +   +  +   +   LP       +L+++N L QGYSG+R E++ A+  L NH + PC+P +G++ ASGDLVPL++++  L G
Sbjct:   12 LSLLSIKQILDEELSCVLAENAFELIRASHQTVKKVIDEKKTVYGINTGFGSLANQTISSD--CLKELQRNI---VLSHACGTGKLLPDDVVALILLLKINNLSQGYSGVRLELINALIALFNHKVYPCIPSKGSVGASGDLVPLAHLSLPLLG 160          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_NATTJ (Histidine ammonia-lyase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hutH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.460e-18
Identity = 54/165 (32.73%), Postives = 88/165 (53.33%), Query Frame = 1
Query:  313 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHR--RTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGR 801
            +++L GE L   ++  +      VELS  A+E + AS   + +   K +  YGVTTGFG  S     ++N   LQ+ LI   +AG+                R  ML R N+L +G+SGIR E ++ +  +LN  + P +P +G++ ASGDL PL+++  ++ G+
Sbjct:    1 MIHLTGENLKFKEIEKVINHGEQVELSTQAKENIIASRRLIDDLTEKESIVYGVTTGFGKFSDTFISSENLQQLQENLILSHSAGV-------GEPFSEQVVRGMMLFRANSLAKGHSGIRLETVQLLIDMLNKGVHPIIPSKGSLGASGDLAPLAHMVLVMIGK 158          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_PSYIN (Histidine ammonia-lyase OS=Psychromonas ingrahamii (strain 37) GN=hutH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18
Identity = 50/161 (31.06%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  337 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT--KNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK 813
            LT++Q+  I+  +  V L  S  E + AS+  V + + +   +YG+ TGFG  ++ R   ++   LQ+ ++    AGI          +     R  M++++N+L +G+SGIR  ++EA+  L+N  I PC+P +G++ ASGDL PL++++ +L G   ++
Sbjct:   11 LTLSQLRKISRHALKVSLESSCIEAIHASTQVVNQVIAENRVAYGINTGFGLLANTRIAPEDLETLQRSIVLSHAAGI-------GELMNDETVRMMMVLKINSLARGFSGIRLSVIEALMTLVNAQIYPCVPKKGSVGASGDLAPLAHMSTVLLGEGEAR 164          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_THEVO (Probable histidine ammonia-lyase OS=Thermoplasma volcanium GN=hutH PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 52/164 (31.71%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  313 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            ++ + G+ LT+  V +++     VELS  AR  V       ++ ++ G   YGV TGFG   + +        LQ+ LIR  +AG+          LP    R+ M++R NTL +GYS +  E+++A+  ++N ++ P +P  G++ ASGDL PL++I   + G
Sbjct:    1 MIEIDGDNLTLEDVYSVSVLHEPVELSTKARNKVAEIHRKFLDLISSGQTIYGVNTGFGGLLNIKISREEEIELQRNLIRSHSAGV-------GKYLPTDVVRSIMVIRANTLAKGYSAVSTELIDALLAMINKDVVPAVPEFGSVGASGDLAPLAHIGLAMMG 157          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_LEGPH (Histidine ammonia-lyase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hutH PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18
Identity = 48/154 (31.17%), Postives = 88/154 (57.14%), Query Frame = 1
Query:  337 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            L++  +  I     +  L+E++ E ++AS   V + +++    YG+ TGFG+ +++   +     KEL R +   +  +   +   LP       +L+++N L QGYSG+R E++ A+  L NH + PC+P +G++ ASGDLVPL++++  L G
Sbjct:   12 LSLLSIKQILDEELSCVLAENSFELIRASHQTVKKVIDEKKTVYGINTGFGSLANQTISSD--CLKELQRNI---VLSHACGTGKLLPDDVVALILLLKINNLSQGYSGVRLELINALIALFNHKVYPCIPSKGSVGASGDLVPLAHLSLPLLG 160          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_VIBF1 (Histidine ammonia-lyase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hutH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17
Identity = 48/161 (29.81%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  337 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRT--KNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK 813
            L++ Q+  ++   T + L  +A   +  S+D V + + +G   YG+ TGFG  ++ R   K+   LQ+ ++    AGI          +  +  R  M++++N+L +GYSGIR  +++A+ +L+N  + PC+P +G++ ASGDL PL++++ +L G   ++
Sbjct:   11 LSLKQLREVSRHPTKLSLDPNALPDMLISADVVAQVIEEGKTVYGINTGFGLLANTRIAEKDLETLQRSIVLSHAAGI-------GEFMDDATVRLMMVLKINSLARGYSGIRPLVIDALIQLVNSEVYPCIPKKGSVGASGDLAPLAHMSTVLLGEGEAR 164          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_THEAC (Probable histidine ammonia-lyase OS=Thermoplasma acidophilum GN=hutH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17
Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 1
Query:  313 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGA--TSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            ++ + G +L V  V A+A     V +S+   + V+   +  ++ +N G   YGV TGFG+    H        LQK LIR  ++G+ G+  E+ +       RA M VR+N+L  GYS +  ++L  + ++LN ++ P +P  G++ ASGDL PL++I   + G
Sbjct:    1 MIEIDGRSLRVEDVYAVAVEYDRVSISDDTLKAVEEKHEAFLKLINSGKTVYGVNTGFGSLLNVHIERDQEIELQKNLIRSHSSGV-GDYLENRYV------RAIMAVRLNSLAAGYSAVSADLLNMMVEMLNRDVIPAVPKYGSVGASGDLAPLAHIGLAMMG 157          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_SHESH (Histidine ammonia-lyase OS=Shewanella sediminis (strain HAW-EB3) GN=hutH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17
Identity = 47/157 (29.94%), Postives = 90/157 (57.32%), Query Frame = 1
Query:  334 TLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTG 798
            TLT++Q+  I+    ++EL++SA   +  S+  V + +++G   YG+ TGFG  ++ +        LQ+ ++    AG       +   +  +  R  M++++N+L +G+SGIR E++  +  L+N  + PC+P +G++ ASGDL PL+++   L G
Sbjct:   10 TLTLSQIREISRGKVSLELADSAINDINTSAGLVQQVLDEGRTVYGINTGFGLLANTKIAADDLQLLQRSIVLSHAAG-------TGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLIALVNAEVYPCVPEKGSVGASGDLAPLAHMCLPLLG 159          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_PSEPU (Histidine ammonia-lyase OS=Pseudomonas putida GN=hutH PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17
Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  334 TLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK 813
            TLT+AQ+ AI  +   ++L  SA   + AS   V + + +   +YG+ TGFG  +  R  +     LQ+ L+    AGI          L     R  M++++N+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++
Sbjct:   10 TLTLAQLRAIHAAPVRLQLDASAAPAIDASVACVEQIIAEDRTAYGINTGFGLLASTRIASHDLENLQRSLVLSHAAGI-------GAPLDDDLVRLIMVLKINSLSRGFSGIRRKVIDALIALVNAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKAR 164          
BLAST of FC877013 vs. ExPASy Swiss-Prot
Match: HUTH_PSEPK (Histidine ammonia-lyase OS=Pseudomonas putida (strain KT2440) GN=hutH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.623e-17
Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  334 TLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSK 813
            TLT+AQ+ AI  +   ++L  SA   + AS   V + + +   +YG+ TGFG  +  R  +     LQ+ L+    AGI          L     R  M++++N+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++
Sbjct:   10 TLTLAQLRAIHAAPVRLQLDASAAPAIDASVACVEQIIAEDRTAYGINTGFGLLASTRIASHDLENLQRSLVLSHAAGI-------GAPLDDDLVRLIMVLKINSLSRGFSGIRRKVIDALIALVNAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKAR 164          
The following BLAST results are available for this feature:
BLAST of FC877013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
HUTH_LEGPC4.181e-1831.82Histidine ammonia-lyase OS=Legionella pneumophila ... [more]
HUTH_NATTJ5.460e-1832.73Histidine ammonia-lyase OS=Natranaerobius thermoph... [more]
HUTH_PSYIN7.132e-1831.06Histidine ammonia-lyase OS=Psychromonas ingrahamii... [more]
HUTH_THEVO9.314e-1831.71Probable histidine ammonia-lyase OS=Thermoplasma v... [more]
HUTH_LEGPH9.314e-1831.17Histidine ammonia-lyase OS=Legionella pneumophila ... [more]
HUTH_VIBF12.075e-1729.81Histidine ammonia-lyase OS=Vibrio fischeri (strain... [more]
HUTH_THEAC2.075e-1732.32Probable histidine ammonia-lyase OS=Thermoplasma a... [more]
HUTH_SHESH2.075e-1729.94Histidine ammonia-lyase OS=Shewanella sediminis (s... [more]
HUTH_PSEPU4.623e-1732.10Histidine ammonia-lyase OS=Pseudomonas putida GN=h... [more]
HUTH_PSEPK4.623e-1732.10Histidine ammonia-lyase OS=Pseudomonas putida (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CD12RM1 EHR Citrus clementina cDNA clone KN0AAN3CD12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877013 ID=FC877013; Name=FC877013; organism=Citrus clementina; type=EST; length=820bp
GCACGAGGTAGACTTCAGAATTTCCTTTAGCTCATTCATTCTTCATCACT
CCCATTCATTCTTCTTCTTCTTCTTCTTCTTTCTACAGTTTTGGTATTTT
TTGTAATTGCAGTAACATTTACGTAAAACGATATGGAGATAGGTGCCACT
ACTGAGAATGGTCACCAGAACGGTGGCCTGGAGGGTTTGTGCAAGAATAA
CAATTACAATTACAGTTCTGGGGATGCGTTGAACTGGGGAGTGATGGCGG
AGACGTTGAAGGGGAGCCATTTGGAGGAAGTGAAGCGTATGGTGGCGGAG
TACAGGAAGCCGGTGGTCAACCTCGGTGGTGAGACGTTGACCGTAGCACA
GGTGGCTGCCATTGCCACGTCCTCTACGAATGTGGAGCTGTCGGAATCTG
CCAGGGAAGGCGTCAAGGCCAGCAGTGATTGGGTGATGGAGAGCATGAAT
AAGGGTACCGACAGTTACGGCGTTACCACTGGCTTTGGTGCCACTTCTCA
TCGGAGAACCAAGAACGGCGGTGCTCTTCAGAAGGAGCTCATTAGATTTT
TGAACGCTGGAATCTTTGGAAACGGAACAGAGTCATCTCACACGCTACCT
CACTCAGCAACAAGGGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCA
GGGCTACTCCGGCATCCGATTTGAAATCCTGGAAGCGATCACAAAGCTGC
TCAATCACAACATCACTCCATGCCTCCCTCTTCGCGGCACAATCACTGCT
TCAGGGGATCTGGTTCCTCTTTCCTACATTGCCGGACTGCTCACCGGCCG
GCCCAATTCTAAGGCCACCG
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