FC877019

Overview
NameFC877019
Unique NameFC877019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.346e-50
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVD DG+GTI FPEFL LM+RKM DTD+EEE+KEAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.064e-50
Identity = 98/127 (77.17%), Postives = 111/127 (87.40%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADG+GTI FPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149          

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  163 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DGDG I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 76          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 3.064e-50
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149          

HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  163 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            M D  SEE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MTDALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 3.064e-50
Identity = 99/127 (77.95%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL +MARKMKDTDSEEE+ EAF+ FDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   24 GDGTITTKELGTVMR-SVGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.064e-50
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   13 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 138          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.002e-50
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.002e-50
Identity = 98/127 (77.17%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADG+GTI FPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149          

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  163 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DGDG I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARK 76          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 4.002e-50
Identity = 98/127 (77.17%), Postives = 111/127 (87.40%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 4.002e-50
Identity = 98/127 (77.17%), Postives = 109/127 (85.83%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 196.823 bits (499), Expect = 6.826e-50
Identity = 99/127 (77.95%), Postives = 110/127 (86.61%), Query Frame = 1
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDG ITTKELGT +R + G  P     + +INEVDADGNGTI FPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:   24 GDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149          
The following BLAST results are available for this feature:
BLAST of FC877019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
CALM_EUGGR2.346e-5078.74Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_RENRE3.064e-5077.17Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_HALOK3.064e-5077.17Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM_ACHKL3.064e-5077.95Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALMB_ARBPU3.064e-5077.17Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CALM_STYLE4.002e-5078.74Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PYUSP4.002e-5077.17Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]
CALM_PAXIN4.002e-5077.17Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALMB_HALRO4.002e-5077.17Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM_TETPY6.826e-5077.95Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH11RM1 EHR Citrus clementina cDNA clone KN0AAN1DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877019 ID=FC877019; Name=FC877019; organism=Citrus clementina; type=EST; length=598bp
GGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGCTGTGAGGTGCAC
TGCGGGCGTAACCCCACTGAGGCGGAGCTCCCGGACAGTGATCAATGAAG
TGGATGCTGATGGTAATGGAACTATTGGTTTTCCTGAATTCCTAAACCTC
ATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGC
CTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGC
TGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTT
GATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGATAAATTA
TGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACCCCAACCCACCA
ATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTC
TTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAA
TGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGACAAATGTTGTCTCC
CTCGTCAATATGTCTTGTGACTCGCAACACTTTTCGGTTTTTATTATT
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