FC877065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_DANRE (Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.873e-28 Identity = 73/167 (43.71%), Postives = 99/167 (59.28%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYV-----------QNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD-----KETMEDWDQEPLEK 499 MPPK+ + K + KK+KI+EDKTFGLKNK +K QK++ QN +Q + +++K LN+LFK V+ KV GVDPKS+LC F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+ Sbjct: 1 MPPKKPAPAAANKKTQEKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTK-----KKDDKKKELSELNELFKPVVAAQKVSKGVDPKSVLCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSLYVDGRDDELLEKDTMENWDEKKLEE 161
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.901e-28 Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQEPLEK 499 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TM++WD++ LE+ Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLEKDTMDNWDEKKLEE 161
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.517e-24 Identity = 65/152 (42.76%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 62 KMPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDK-ETMEDWDQEPLEK 499 K PP K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P+ D K L +FK +Q KV G DPKS++C F+K G C KG KCKFSHDL+ + K EK IY D RD+ + M +WD L++ Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLSQENKVEKRSIYVDMRDEDDPMTNWDDAKLKE 152
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 2.517e-24 Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 2 Query: 65 MPPKQQS---KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR----DKETMEDWDQEPLEK 499 MPPKQQ K+E +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+D R D+ET E+WD + L + Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNE 151
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.249e-23 Identity = 62/154 (40.26%), Postives = 85/154 (55.19%), Query Frame = 2 Query: 65 MPPKQ-----QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKI--AVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKE--TMEDWDQEPLEK 499 MPPK+ K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ + L ++ I V KV G DPKS++C F+K G C KG KCKFSHDL+++ K EK +Y D RD E M +WD L++ Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFKPVQTQKVDKGTDPKSVVCAFFKQGLCTKGDKCKFSHDLSLENKVEKRSMYVDMRDNEDDLMTNWDDAKLKE 153
BLAST of FC877065 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.131e-23 Identity = 62/147 (42.18%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 65 MPPKQ--QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQEPLEK 499 MPPKQ KAE +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+DK T E+WD+E L++ Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADK----TNENWDKEKLDE 142 The following BLAST results are available for this feature:
BLAST of FC877065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877065 ID=FC877065; Name=FC877065; organism=Citrus clementina; type=EST; length=501bpback to top |