FC877106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.493e-24 Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = -3 Query: 355 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLM-ETNSSFSKLV 744 D +W+ALE+C L ++ LD + + G+N S GQRQL CL R LL +IL +DEA AS+D TD +LQ+ I + F+N TV+T+AHR+ T+++SD V+VL G+++E D PS L + +S F +L+ Sbjct: 1358 DRALWQALEQCHLSEVAVAMGG-LDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSALRNQPHSLFQQLL 1487
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.325e-24 Identity = 53/132 (40.15%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 349 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAE 744 D+ IW ALE QLK ++SLP +L S +G++ S GQ+QL CL R LL++ +IL+LDEA AS+D T+ +Q + + F+ CTV+ +AHR+ +V++ V+V+ G++ E P++L+ F +L E Sbjct: 1367 DEGIWAALETVQLKAFVTSLPGQLQYECSGQGDDLSVGQKQLLCLARALLRKTQILILDEATASVDPGTEIQMQAALERWFAQCTVLLIAHRLRSVMNCARVLVMDEGQVAESGSPAQLLAQKGLFYRLAQE 1498
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MRP7_HUMAN (Multidrug resistance-associated protein 7 OS=Homo sapiens GN=ABCC10 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.672e-24 Identity = 57/131 (43.51%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 355 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLM-ETNSSFSKLV 744 D +W+AL++C L I+S+ LD + + G + S GQRQL CL R LL +IL +DEA AS+D TD +LQ+ I + F+N TV+T+AHR+ T+++SD V+VL G+++E D P+ L + +S F +L+ Sbjct: 1349 DRALWQALKQCHLSEVITSMGG-LDGELGEGGRSLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPATLRNQPHSLFQQLL 1478
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 355 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSS-FSKLV 744 D IW+ L+KC++K + S+ LDS V + G ++S GQRQL CL R LLK ++IL LDE A+ID T ++L I E TVIT+AHR+ TV+D D +++L G L+E +P L++ +SS FS V Sbjct: 1061 DWRIWEILDKCKVKAAVESVGG-LDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTISSECKGVTVITIAHRISTVVDLDSILILDRGILVEQGKPQHLLQDDSSTFSSFV 1190
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.155e-23 Identity = 51/132 (38.64%), Postives = 84/132 (63.64%), Query Frame = -3 Query: 349 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAE 744 D+ IW ALE QLK ++SLP +L + +G++ S G +QL CL R LL++ +IL+LDEA AS+D T+ +Q + + F+ CT++ +AHR+ +V+D V+V+ G++ E P++L+ F +L E Sbjct: 1363 DEGIWAALETVQLKAFVTSLPGQLQYECAGQGDDLSVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAESGNPAQLLAQKGLFYRLAHE 1494
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.815e-23 Identity = 51/131 (38.93%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 355 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENW-SAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLV 744 D+ IW LE +LK I +P KL+S + + G S GQ+QL CL R L+K +++++DEA +S+D T ++ +I + N T++T+AHR+ +IDSD + V+ KL+E++ P L+ +NS F K+V Sbjct: 1206 DEMIWNYLEMVKLKKLIIEMPLKLNSKIHENGNTTLSYGQKQLLCLCRCLIKNPKLIIMDEATSSVDFQTAETIKSVINENLVNNTILTIAHRLDIIIDSDKIAVIDNSKLIEFENPKNLINSNSKFRKIV 1336
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.397e-22 Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = -3 Query: 355 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMET----NSSFSKLV 744 D EIW ALEK +LK TIS LP K+D+ + ++ N S GQ+QL CL RVLLK +++ DE ++SID T L +++ +N T +T+AHR+ T+IDSD ++V+ G+L+E + + + NS F K V Sbjct: 1186 DSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENITNSTTLTIAHRIDTIIDSDRILVIDSGELIEIFDKNNINNNINNQNSKFKKFV 1318
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MDLB_BUCAI (Multidrug resistance-like ATP-binding protein mdlB OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mdlB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.383e-22 Identity = 48/138 (34.78%), Postives = 87/138 (63.04%), Query Frame = -3 Query: 331 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKLVAEYWSSCR 744 ++++W L+ L + S+P + S + +EG N S GQ+QL + RVL+ ++L+LDEA A+IDS T+ ++Q+ + NCT+I +AHR+ T+I++D ++VL GK++E+ +L+ S + K+ + SC+ Sbjct: 444 EEKVWNILDTVHLSDLVKSMPKGIYSLLGEEGNNLSVGQKQLLAIARVLVAYPKVLILDEATANIDSGTEQLIQKTLLSIRKNCTLIIIAHRLSTIIEADSIIVLKKGKIVEFGTHEQLLTKKSCYYKMYK--FQSCK 579
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: MDLB_BUCAP (Multidrug resistance-like ATP-binding protein mdlB OS=Buchnera aphidicola subsp. Schizaphis graminum GN=mdlB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 46/129 (35.66%), Postives = 83/129 (64.34%), Query Frame = -3 Query: 358 DDEIWKALEKCQLKTTISSLPNKLDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKLMETNSSFSKL 744 +++IW L+ L + + S+P + S + +EG N S GQ+QL + R+L++ +IL+LDEA A+IDS T+ ++Q + + T++ +AHR+ TVI++DM++VL GK++E +L+E + K+ Sbjct: 444 EEKIWNVLKTVHLSSLVQSMPKGIYSILGEEGNNLSLGQKQLLAIARILVRNPKILILDEATANIDSGTEKLIQTTLSSIRAKTTLVVIAHRLSTVIEADMIVVLKKGKIVELGTHKQLLEKKGFYWKM 572
BLAST of FC877106 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.441e-21 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 367 LDSSVSDEGENWSAGQRQLFCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEP-SKLMETNSSF 675 L S +S+ G N S GQRQL CL R LL+ +I++LDEA ASID ++DA +Q IR+EF T++T+AHR+ +VID D ++V+ G++ EYD P S L+ S+F Sbjct: 1528 LSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVMDAGEVKEYDHPYSLLLNKQSAF 1631 The following BLAST results are available for this feature:
BLAST of FC877106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 382
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877106 ID=FC877106; Name=FC877106; organism=Citrus clementina; type=EST; length=746bpback to top |