FC877108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPEL 436 Y+G+R R+WGKWVAEIREP+ +R+WLG++++ AA AYD A + G SARLN PE+ Sbjct: 72 YRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEI 130
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana GN=ERF024 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 260 YKGIRMRK-WGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQEDDLRDVSAASIRKKATEVGAKVDALQAAL 535 Y+G+R RK KWV+EIREP K +RIWLG+++TP AA AYD A L+G A LNFP + +S A I+ A A A + A+ Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAI 107
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+RMR WGK+ AEIR+P +R +R+WLG++ T I AARAYD F LRG A LNFP Sbjct: 137 YRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFP 194
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQE--DDLRDVSAASIRKKA 493 ++G+R R+WG WV+EIR P + R+WLG++ T AAARAYD A + G +A+ NFP + +E D ++DV++ + K+ Sbjct: 7 FRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKS 86
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELI--FQEDD---LRDVSAASIRKKATE 499 Y+G+R R WGK+ AEIR+PN++ +R+WLG++ T I AA+AYD A F LRG A +NFP + F++ D L+ ++ R + TE Sbjct: 145 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRETE 230
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFPELIFQED 451 Y+G+R R WG++ AEIR+P K++R+WLG++ T AARAYDTA RG A+ NFP + D Sbjct: 25 YRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSD 88
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+R R WG++ AEIR+P K+SR+WLG++ TP AARAYD RG A+ NFP Sbjct: 20 YRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 YKGIR R WG+W AEIR+P K R+WLG++ T AARAYD +RG A+LNFP Sbjct: 25 YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFP 81
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNF 427 ++G+R R WGKW AEIR+P KR R+WLG+Y T AA YD A LRGP A NF Sbjct: 122 FRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 177
BLAST of FC877108 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 260 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYTTPIAAARAYDTAVFYLRGPSARLNFP 430 Y+G+R R WGK+ AEIR+PN++ +R+WLG++ T I AA+AYD A + LRG A +NFP Sbjct: 138 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFP 195 The following BLAST results are available for this feature:
BLAST of FC877108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877108 ID=FC877108; Name=FC877108; organism=Citrus clementina; type=EST; length=705bpback to top |