FC877114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_ERWCT (Valyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=valS PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.996e-55 Identity = 113/251 (45.02%), Postives = 156/251 (62.15%), Query Frame = 1 Query: 118 QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGE---GFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 QD DVLDTWFSSGL+ S LGWP+ T DLK+F+P+SV+ +G DI+FFW+ARM+ML + +VPF VY+ +IRD G+KMSKS GNVIDPL++++GISLE L ++ + P+ E +K + FPNGI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF + + GF L + +WIL+ N+ + +L+ Y F AA+ +Y + QFCD Sbjct: 468 QDEDVLDTWFSSGLWTFSTLGWPEQTPDLKSFHPSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPFNTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQDCGF----NGGEMELSLADRWILAEFNRTVKAYRDALDGYRFDIAANILYEFTWNQFCD 714
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_PHOLL (Valyl-tRNA synthetase OS=Photorhabdus luminescens subsp. laumondii GN=valS PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.447e-55 Identity = 119/277 (42.96%), Postives = 164/277 (59.21%), Query Frame = 1 Query: 31 NDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 N + V R E+E V + G + QD DVLDTWFSSGL+ S LGWP+ TD LK F+PT VL +G DI+FFW+ARM+M+ + +VPF VY+ +IRD G+KMSKS GNVIDPL++++GISLE L ++ + P+ E +K + FP GI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF + EG L + +WIL+ N+ + +L++Y F AA+ +Y + QFCD Sbjct: 456 NGNVYVGRSEEE---VRRENNLGTDISLNQDEDVLDTWFSSGLWTFSTLGWPEQTDALKTFHPTDVLVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLEELLEKRTGNMMQPQLAEKIRKRTEKQFPAGIETHGTDALRFTLAALASTGRDINWDMKRLQGYRNFCNKLWNASRFVLMNT-EGQDCGQHGGEMALSLADRWILAEFNQTVKAYREALDTYRFDMAANILYEFTWNQFCD 728
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_LEGPL (Valyl-tRNA synthetase OS=Legionella pneumophila (strain Lens) GN=valS PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.808e-55 Identity = 106/246 (43.09%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 118 QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP----PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 QD DVLDTWFSS L+P S LGWP+ T +L+ FYPTSVL TG DI+FFWVARM+M+G+K G++PF +V++ +IRD+ G KMSKS GNV+DPL++++GI L+ L + + + K + +FP GI GTDALRF S + + D+ RV GYR +CNKLWNA R+ + E + + P + +WILS L +S+ +Y F A+T+Y + +++CD Sbjct: 442 QDEDVLDTWFSSALWPFSTLGWPERTPELEQFYPTSVLVTGFDIIFFWVARMIMMGLKFTGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIELDSLIAKRTSNLMLNSVRDRITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEGYRNFCNKLWNAARYVLLNTDEEQIDFGDGAFQYSPAD-----QWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWHEYCD 682
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_LEGPH (Valyl-tRNA synthetase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=valS PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.808e-55 Identity = 106/246 (43.09%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 118 QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP----PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 QD DVLDTWFSS L+P S LGWP+ T +L+ FYPTSVL TG DI+FFWVARM+M+G+K G++PF +V++ +IRD+ G KMSKS GNV+DPL++++GI L+ L + + + K + +FP GI GTDALRF S + + D+ RV GYR +CNKLWNA R+ + E + + P + +WILS L +S+ +Y F A+T+Y + +++CD Sbjct: 442 QDEDVLDTWFSSALWPFSTLGWPERTPELEQFYPTSVLVTGFDIIFFWVARMIMMGLKFTGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRDRITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEGYRNFCNKLWNAARYVLLNTDEEQIDFGDGAFQYSPAD-----QWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWHEYCD 682
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_LEGPA (Valyl-tRNA synthetase OS=Legionella pneumophila (strain Paris) GN=valS PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.808e-55 Identity = 106/246 (43.09%), Postives = 151/246 (61.38%), Query Frame = 1 Query: 118 QDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVP----PLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 QD DVLDTWFSS L+P S LGWP+ T +L+ FYPTSVL TG DI+FFWVARM+M+G+K G++PF +V++ +IRD+ G KMSKS GNV+DPL++++GI L+ L + + + K + +FP GI GTDALRF S + + D+ RV GYR +CNKLWNA R+ + E + + P + +WILS L +S+ +Y F A+T+Y + +++CD Sbjct: 442 QDEDVLDTWFSSALWPFSTLGWPERTPELEQFYPTSVLVTGFDIIFFWVARMIMMGLKFTGKIPFKEVFITGLIRDSEGHKMSKSKGNVLDPLDIVDGIDLDSLIAKRTSNLMLNSVRDRITKATRKEFPEGISAYGTDALRFTYCSLASTGRNVRFDLGRVEGYRNFCNKLWNAARYVLLNTDEEQIDFGDGAFQYSPAD-----QWILSRLQNTVSKVHHYFETYRFDLLANTLYEFVWHEYCD 682
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_ACTPJ (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=valS PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.690e-54 Identity = 118/274 (43.07%), Postives = 161/274 (58.76%), Query Frame = 1 Query: 46 VARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSC--KWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 VAR E+E V K + QD DVLDTWFSSGL+ S LGWP+ T +LK F+PT VL TG DI+FFWVARM+M + +VPF VY+ +IRD G+KMSKS GNV+DP+++I+GISLE L ++ + P+ E K + +F NGI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF ++ L L + +S +WI S N+ + +L+ Y F AA+ +Y + +FCD Sbjct: 453 VARSEEE---VRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAHGTDALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASRFVLTN------DKLDLSAGEVEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCD 717
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_ACTP7 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=valS PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.690e-54 Identity = 118/274 (43.07%), Postives = 161/274 (58.76%), Query Frame = 1 Query: 46 VARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSC--KWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 VAR E+E V K + QD DVLDTWFSSGL+ S LGWP+ T +LK F+PT VL TG DI+FFWVARM+M + +VPF VY+ +IRD G+KMSKS GNV+DP+++I+GISLE L ++ + P+ E K + +F NGI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF ++ L L + +S +WI S N+ + +L+ Y F AA+ +Y + +FCD Sbjct: 453 VARSEEE---VRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAHGTDALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASRFVLTN------DKLDLSAGEVEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCD 717
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_ACTP2 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=valS PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.690e-54 Identity = 118/274 (43.07%), Postives = 161/274 (58.76%), Query Frame = 1 Query: 46 VARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSC--KWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 VAR E+E V K + QD DVLDTWFSSGL+ S LGWP+ T +LK F+PT VL TG DI+FFWVARM+M + +VPF VY+ +IRD G+KMSKS GNV+DP+++I+GISLE L ++ + P+ E K + +F NGI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF ++ L L + +S +WI S N+ + +L+ Y F AA+ +Y + +FCD Sbjct: 453 VARSEEE---VRQKHNLPADLALRQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFENGIAAHGTDALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASRFVLTN------DKLDLSAGEVEYSLADRWIESKFNRTVGEFREALSQYRFDLAANAIYDFTWNEFCD 717
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_DECAR (Valyl-tRNA synthetase OS=Dechloromonas aromatica (strain RCB) GN=valS PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.207e-54 Identity = 122/288 (42.36%), Postives = 161/288 (55.90%), Query Frame = 1 Query: 31 NDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDD------TDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLP-----------FSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 N VA E EA A A K+ G + +D DVLDTWFSS L+P S L W D LK + P+SVL TG DI+FFWVARMVM+ ++ G++PF VY+H +IRD G+KMSKS GNV+DP+++I+GI LE L ++ G ++PK+ E K K +FP GI GTDALRF S + I D+ R GYR +CNKLWNA RF + + EG L+ H N P F+ +WI+S L + Y F A +Y + +FCD Sbjct: 428 NGQIFVAHSEAEAKAEAAKQ--GYTGTLKRDEDVLDTWFSSALWPFSTLDWTGDEAIDAANPLLKQYLPSSVLVTGFDIIFFWVARMVMMTKQITGQIPFKHVYVHGLIRDGEGQKMSKSKGNVLDPIDLIDGIGLEALIEKRTTGLMNPKQAESIAKKTKKEFPEGIASFGTDALRFTFASLASPGRDIKFDLNRCDGYRNFCNKLWNATRFVLMNV-EGHDLALE-HQQNGPACGGSAPLEFSFADRWIVSQLQRVEQEVEQHFTDYRFDLIAQAIYKFIWDEFCD 711
BLAST of FC877114 vs. ExPASy Swiss-Prot
Match: SYV_MANSM (Valyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=valS PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.883e-54 Identity = 120/274 (43.80%), Postives = 159/274 (58.03%), Query Frame = 1 Query: 46 VARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL------GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMS--KLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCD 843 V R E+E V +K + QD DVLDTWFSS L+ S LGWP T +L F+PT+VL TG DI+FFWVARM+M+ + +VPF VY+ +IRD G+KMSKS GNVIDPL++I+GI LE L + + P+ E K K +FP GI GTDALRF L + + IN D++R+ GYR +CNKLWNA RF ++ KL L L + KWI + NK + ++L+ Y F AA+ +Y + QFCD Sbjct: 453 VGRSEEE---VRSKNGLNSSVALRQDEDVLDTWFSSALWTFSTLGWPQQTKELAMFHPTNVLITGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVIDPLDMIDGIDLESLLAKRTGNMMQPQLAEKIAKATKKEFPEGIQPHGTDALRFTLSALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLTNDKL------DLSTGERELSLADKWIQAEFNKTVQNFRNALDQYRFDLAATELYEFTWNQFCD 717 The following BLAST results are available for this feature:
BLAST of FC877114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 334
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877114 ID=FC877114; Name=FC877114; organism=Citrus clementina; type=EST; length=843bpback to top |