FC877241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19 Identity = 55/127 (43.31%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 65 MPPKQQS-------KAELAKKQKIVEDKTFGLKNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPXSILCEFYKAGQCQKGFKCKFSHDLN 409 MPPK+Q KA+ KK+KI+EDKTFGLKNK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DP S++C F+K GQC KG KCKFSHDL+ Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLS 127
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.727e-18 Identity = 56/122 (45.90%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 65 MPPKQ-QSKAELAK-KQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNV-----QPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPXSILCEFYKAG-QCQKGFKCKFSHDL 406 MPPKQ QSK + K K+K VEDKTFGLKNKNKSK V YV ++ V Q K K + + Q KVP+GVDP SI+CE++K G C KG +CKF+HDL Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALKEKAKRDKELAEKAKKEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFAHDL 122
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.868e-18 Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 62 KMPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPXSILCEFYKAGQCQKGFKCKFSHDLN 409 K PP K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P+ D K L +FK +Q KV G DP S++C F+K G C KG KCKFSHDL+ Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLS 121
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.155e-17 Identity = 49/122 (40.16%), Postives = 66/122 (54.10%), Query Frame = 2 Query: 65 MPPKQ-----QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKI--AVSQPKVPVGVDPXSILCEFYKAGQCQKGFKCKFSHDLN 409 MPPK+ K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ + L ++ I V KV G DP S++C F+K G C KG KCKFSHDL+ Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFKPVQTQKVDKGTDPKSVVCAFFKQGLCTKGDKCKFSHDLS 121
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 3.155e-17 Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 65 MPPKQQS---KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPXSILCEFYKAGQCQKGFKCKFSHDL 406 MPPKQQ K+E +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDP S+LC F+K G C KG KCKFSHDL Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDL 116
BLAST of FC877241 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.382e-17 Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 65 MPPKQ--QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPXSILCEFYKAGQCQKGFKCKFSHDL 406 MPPKQ KAE +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDP S+LC F+K G C KG KCKFSHDL Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDL 115 The following BLAST results are available for this feature:
BLAST of FC877241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877241 ID=FC877241; Name=FC877241; organism=Citrus clementina; type=EST; length=410bpback to top |