FC877283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877283 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11 Identity = 53/137 (38.69%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 127 PIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGGMLPVPVDMGAGIPRRDASVGQP-MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQ 534 P MP Q P G A YP G N + G M+P V AG +A P MP + LA E ++ +LGE LYP V E + K+TGMLLEM +E+L LLE AL +V EA+ VL+ Q+ Sbjct: 514 PGMPTQFPAGGPAPGYP-GMNARGPVPAQGRPMMMPGSVP-SAGPAEAEAVPAVPGMPERFTAADLAAVPEESRKQVLGELLYPKVFVREEKLSGKITGMLLEMPNSELLELLEDDSALNERVNEAIGVLQEFVDQE 648
BLAST of FC877283 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11 Identity = 47/139 (33.81%), Postives = 68/139 (48.92%), Query Frame = 1 Query: 151 PRGHAYRYPLGRNMQDFPFDMGAGGMLPVPVDMGAGIPRRDASVGQPMPITALSTALANAS-PEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM----EVLRSVAQQQANNPAD 552 PRG+A GR P GA P D+ AG + L LA P+ Q+ ++GE+L+P ++ ++ A K+TGMLLEMD E+++L E AL KV EA+ E L++ QQ PA+ Sbjct: 631 PRGNANFMAAGRGASPIP---GA------PADLSAG--------------SFLQAQLATTQDPQAQKQIIGENLFPKIQAIQPALAGKITGMLLEMDNAELINLFEDDNALNVKVQEALAVYDEYLKTQGQQPTQQPAE 746 The following BLAST results are available for this feature:
BLAST of FC877283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877283 ID=FC877283; Name=FC877283; organism=Citrus clementina; type=EST; length=683bpback to top |