FC877781

Overview
NameFC877781
Unique NameFC877781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.115e-22
Identity = 77/265 (29.06%), Postives = 124/265 (46.79%), Query Frame = 1
Query:  136 PPGPKPWPIIGNL-HLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQE-LNLFLNRLYESFG-------KPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAK-RFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADDLTLE 900
            PPGP   P++G L HL+ S P  +L  L+ KYGP+M L+ G    VV SS   A+ +L+ +D +F+ RP     +   ++  D+ ++PYG YWR  RK+C++EL S K +     +R  E L L  N    S G       KP  L   L+  +  I ++   G+          V   ++F   +D     +G    GD  P L F+D    ++     A+ + D   + ++ +        E +    +V+VLL++ D   LE
Sbjct:   60 PPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQAC-------GVELQEQFLTALDVGLKFSGGFCFGDLFPSLRFIDAMTGLRSRLWRARGQLDSVFDKIIAQ-------CEEHQGDSLVNVLLRIRDQGDLE 310          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22
Identity = 81/260 (31.15%), Postives = 126/260 (48.46%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGP--IMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLA----IISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDS----IPWLGFLDLQGNIK--KMKALAKRFDKFLEHVLDEHDARRK--GVEYYVAKDMVDVLL 873
            P  P   PI+G+LH IG   H SL  L  KYG    + L+ G+ P ++ SS   A+ +++T D + + RP + A     +N  D+ +SP G YW+Q RK+ +  L S K++ SF + R +E+ L ++ L E+  K       +S++  A    ++SR VLG  +  K              +  E+ M N  L VG +    IP     DL   +   K+    KR+D  LE V+ EH   RK  G +   + D +D+ L
Sbjct:   58 PSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGR----------NTLFREMTMTNVDLLVGFNLEYYIPRWPLTDLLFRLVCWKVTRHLKRWDALLEEVIHEHVEMRKLSGDKEKESDDFIDIFL 307          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.228e-22
Identity = 80/268 (29.85%), Postives = 132/268 (49.25%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGP--IMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLN--RLYESFGKPTI--LKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSI-----PWLGFLDLQGNIKKMKA--LAKRFDKFLEHVLDEH-DARRKGVEYYVAKDMVDVLLQLADDLTL 897
            PPG  P  IIG+LHLIG+  H S+  L  K+G   ++ L+ G+ P +  SS   A  +L+TQD +F+ RP   A +   +  SD+ + PYG Y RQ RK+ +  + S K+++SF + R +E+ L ++  R   +   P    L D LS  +  ++SR VLG  + +          Q    +  EL  +N  L  G ++     P +   D+   +  +KA  L +R++   + ++ EH  +R  G       D + VLL +  +  L
Sbjct:   62 PPGKLP--IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIRAAATAAPPAAVDLSDLLSGYTNDVVSRAVLGASHRN----------QGRNRLFSELTEINVSLLAGFNLEDYFPPNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLSIQQEYGL 317          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.440e-22
Identity = 74/259 (28.57%), Postives = 120/259 (46.33%), Query Frame = 1
Query:  136 PPGPKPWPIIGNL-HLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFG--KPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD-LQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADDLTLE 900
            PPGP   P++G L HL+ S P  +L  L+ KYGP+M L+ G    VV SS   A+ +L+ +D  F+ RP     +   +   DI ++PYG YWR  RK+C++EL S K +     IR  E    +  +  + G  KP  L   L   +    ++   G+    +  E       +F   +DE    +     GD  P L F+D + G   +++ L  + D   + ++ +        E      +V+VLL++ D   L+
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQE-------QFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRLERLRLQLDTVFDKIVAQ-------CESNPGDSLVNVLLRIKDQGELD 280          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.440e-22
Identity = 81/254 (31.89%), Postives = 128/254 (50.39%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIR---VQELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADD 888
            PPGP   PIIGNLHL+G+LPH+SL  L++ +GPIM L+ G    +V SSA  A+ +LK QD  FS R    A +        I++      WR  R+I S  +FS   LE+ +++R   V+EL  +  +   S     I +      SL ++S  +  K  TD   +    + +EF  ++  + + +   ++ D  P L  +D QG IK  + +A+ F K L  + D+    R     +   D++DV L++  D
Sbjct:   29 PPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRAYNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFR-TSLNLLSNTIFSKDLTDPYED----SGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQG-IK--RGMARHFSKVL-GIFDQLIEERMRTGRFEQGDVLDVCLKMMQD 273          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.747e-21
Identity = 79/252 (31.35%), Postives = 123/252 (48.81%), Query Frame = 1
Query:  145 PKPWPIIGNLH-LIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILK--DHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPW-LGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADD 888
            P   PIIG+LH L+ SL H+SL  LS KYGP++ L   +FPVV+ SSA +A  I K  D   S R      +      S    +PYG YW+  +K+   +L   + LE    IR  EL  F   L +   K   ++     + LS+  I RM +G+ ++++  E E V       +V EL  L   + + + + W L  L +    K++  ++  FD+ LE ++ E   R K    +    ++DVLL+  +D
Sbjct:   43 PPSLPIIGHLHHLLSSLAHKSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLLDKAMKKESVEIGKEATKLSINSICRMSMGRSFSEESGEAERV-----RGLVTELDGLTKKVLLVNILRWPLEKLRISLFKKEIMYVSNSFDELLERIIVE---REKKPNEHQGTYLMDVLLEAYED 286          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.765e-20
Identity = 75/262 (28.63%), Postives = 123/262 (46.95%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLH--LIGSLPHRSLHALSEKYGP-IMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE-----SFGKPTILKDHLSDLSLA-IISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVL---DVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLAD 885
            PPGP PWP++GNL   L+     R +H +  + G  I  +K G   VV  +  E+A+ +L+ QDA F  RP T A +  +  Y +   SPYG  W++ R++ + E+    R       R  E +     +Y      + G   +   H++      +I R++  ++Y  +   +    P E   M D +F   G+L    V D +PWL  LDL G+ K +K      ++  + V+D+   + K  E    +D +DVL+ L D
Sbjct:   69 PPGPVPWPVVGNLPEMLLNKPAFRWIHQMMREMGTDIACVKLGGVHVVSITCPEIAREVLRKQDANFISRPLTFASETFSGGYRNAVLSPYGDQWKKMRRVLTSEIICPSRHAWLHDKRTDEADNLTRYVYNLATKAATGDVAVDVRHVARHYCGNVIRRLMFNRRYFGEPQADGGPGPMEVLHM-DAVFTSLGLLYAFCVSDYLPWLRGLDLDGHEKIVKEANVAVNRLHDTVIDDRWRQWKSGERQEMEDFLDVLITLKD 329          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A1_OPSTA (Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 83/266 (31.20%), Postives = 131/266 (49.25%), Query Frame = 1
Query:  139 PGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESF--EYIRVQELNL-----FLNRLYESFGKPTILKDHLSDLSLA---IISRMVLGKKYT--DKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADDLTLE 900
            PGPKP PIIGN+  IG  P+++L ALS++YGP+ Q++ G  PVVV S +E  +  L  Q   FSGRP     ++ +   S    +     WR  RK+    L S   LES   EY  + E ++     +L +   +  K     D   ++ ++   +I  M  G++Y   D++L + V   +EF  +V       G  ++ D IP L FL     +KK  ++  RFDKF++ ++ EH A          +D+ D L+   +D  L+
Sbjct:   46 PGPKPLPIIGNVLEIGRKPYQTLTALSKRYGPVFQIQIGMRPVVVLSGSETVRQALIKQGEDFSGRPDLYTFQFISDGKSLAFSTDKVGVWRARRKLAYSALRSFSSLESTNQEYSCMLEEHICKEGEYLVKQLNTSMKANGSFDPFRNIVVSVANVICGMCFGRRYDHYDQELVSLVNLSEEFGQVV-------GTGNLADFIPVLRFLPSTA-MKKFLSINDRFDKFVKKIVSEHYATYNKDN---IRDITDSLIDHCEDRKLD 300          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.507e-19
Identity = 74/250 (29.60%), Postives = 111/250 (44.40%), Query Frame = 1
Query:  136 PPGPKPWPIIGNL-HLIGSLPHRSLHALS---EKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLL 873
            PP P  WPI+G+L  LI       L  +S   +KYGP++ LKFG    +  S+ E A  +L+T D + SGR      +        I WS    YW++ RKI   E+FS K L++ E  R +     +N +    G    L+  L   +L ++  +V  K   +   +++ V   +   ++  + M  G  DV    P L   DL G  +KM    K   K  E  +    A R        KDM+DVL+
Sbjct:   29 PPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFIMTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDK---LIHGMLMTGGDFDVASYFPVLARFDLHGLKRKMDEQFKLLIKIWEGEVLARRANRNP----EPKDMLDVLI 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.480e-19
Identity = 77/252 (30.56%), Postives = 120/252 (47.62%), Query Frame = 1
Query:  166 GNLH-LIGSLPHRSLHALSEKYGPIMQLKFGS-FPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE-------SFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKM-------KALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLL 873
            GN+  L GS P++ +  L EKYGPI+ LK GS    +V  +A  A  + +  D  FS RP         +    +  +PYG YWR +R+IC++E+F  KR+     IR + ++  L RL E         G+   +  ++   S  ++  M+  K   D   + E     EF   +  +    GV ++ D  P L   D+QG  KKM       K + K   KF+E  ++E   R+KG +    KD++DVL+
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESVDKML-RLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSK---DLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITK---KFIEERIEE---RKKGEKNRSIKDLLDVLI 243          
The following BLAST results are available for this feature:
BLAST of FC877781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C99A2_ORYSJ1.115e-2229.06Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71C3_MAIZE2.484e-2231.15Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71C2_MAIZE7.228e-2229.85Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C99A3_ORYSJ9.440e-2228.57Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C76B1_HELTU9.440e-2231.897-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C75AK_ARATH2.747e-2131.35Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C79A1_SORBI6.765e-2028.63Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
CP1A1_OPSTA1.507e-1931.20Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 ... [more]
C80A1_BERST1.507e-1929.60Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C76A1_SOLME7.480e-1930.56Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA24CC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877781 ID=FC877781; Name=FC877781; organism=Citrus clementina; type=EST; length=902bp
CTCCGATACACTAAAGCTAGTTTTACAACTATGGAGCTCATTCATCCCTC
TTGGGCTTCCTACTTGGTCGCTTGGCTAGCAACCCTTGCCCTAGTCCTCC
TCTCCCTCCGTCTCAGGCGCCGGAAACTCAACTTGCCGCCAGGCCCGAAA
CCCTGGCCAATCATTGGAAACCTCCACCTCATCGGCTCACTTCCCCATCG
CTCCCTCCATGCGTTGTCCGAAAAATATGGGCCCATTATGCAGCTTAAAT
TCGGGTCATTCCCCGTTGTCGTGGGCTCTTCCGCTGAGATGGCTAAGGTT
ATCCTCAAAACCCAAGATGCACTGTTTTCTGGCCGCCCCAAAACAGCAGC
CGGCAAGTACACAACCTTCAATTACTCAGATATTACTTGGTCACCTTATG
GACCATACTGGCGTCAGGCTCGTAAAATTTGTTCAATGGAATTGTTTAGT
GTTAAACGCCTCGAATCATTTGAGTACATAAGAGTACAAGAATTGAACTT
ATTTCTCAATCGCTTGTATGAATCATTCGGCAAGCCAACTATATTGAAAG
ATCATCTTTCGGATTTGAGTCTTGCTATTATAAGCCGTATGGTTTTGGGG
AAGAAATACACAGACAAGCAGCTCGAAAATGAGGTTGTGACACCGCAAGA
GTTCACGGCAATGGTTGATGAATTGTTCATGCTTAATGGGGTTTTAGATG
TCGGCGATTCGATTCCTTGGCTAGGGTTTTTGGATTTGCAAGGTAATATA
AAGAAAATGAAGGCTTTGGCTAAGAGGTTTGACAAGTTTTTGGAGCATGT
GCTGGATGAACATGACGCTAGAAGAAAAGGTGTCGAATATTATGTGGCTA
AAGATATGGTGGATGTGCTTTTGCAGCTTGCTGATGATCTCACTCTTGAA
GT
back to top