FC877781

Overview
NameFC877781
Unique NameFC877781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A2_PONAB (Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 59/243 (24.28%), Postives = 104/243 (42.80%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSP-YGPYWRQARKIC--SMELFSVKRLESFEYIRV------QELNLFLNRLYESFGKPTILKDHLSDLSLAIIS------RMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGN--IKKMKALAKRFDKFLEHVLDEH 813
            PP P  WP++G++  +   PH +L  +S++YG ++Q++ GS PV+V S  +  +  L  Q   F GRP   +    T   S +T+SP  GP W   R +   ++  FS+    +  Y         +E    ++RL E    P     H    +  ++S       M  G+ + +        +  E  ++V            G+ + +   L    N  +++ KA  +RF +FL   + EH
Sbjct:   42 PPEPWGWPLLGHVLTLRKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSGLDTIRQALVRQGDDFKGRPDLYSSTLITDGQS-LTFSPDSGPVWAARRHLAQNALNTFSIASDPASSYSCYLEEHVSKEAEALISRLQELMAGP----GHFDPYNQVVVSVVNVIGAMCFGQHFPE--------SSDEMLSLVKNTHEFVETASSGNPVDFFPILRYLPNPALQRFKAFNQRFLRFLRKTVQEH 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A2_HUMAN (Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 63/249 (25.30%), Postives = 103/249 (41.37%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLAIISR---MVLGKKYTDKQLENEVVTP-----------QEFTAMVDELFML----NGVLDVGDSIPWLGFLDL-----QGNIKKMKALAKRFDKFLEHVLDEH 813
            PP P  WP++G++  +G  PH +L  +S++YG ++Q++ GS PV+V S  +  +  L  Q   F GRP        T   S    +  GP W   R++                     LN F      +      L++H+S  + A+ISR   ++ G  + D    N+VV             Q F    DE+  L    +  ++   S   L F  +        +++ KA  +RF  FL+  + EH
Sbjct:   42 PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQ-----------------NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPY--NQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A2_CALJA (Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 62/237 (26.16%), Postives = 107/237 (45.15%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSP-YGPYWRQARKIC--SMELFSV---KRLESFEYIR---VQELNLFLNRLYESFGKPTILK--DHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEH 813
            PP P  WP++G++  +G  PH +L  +S++YG ++Q+  GS PVVV S  +  +  L  Q   F GRP   +    T   S +++SP  GP W   R++   ++  FS+       S  Y+     +E    + RL E    P      + + +  + +I  M  G+ + +   +  +   +     V+     N V    D  P L +L     +++ KA  +RF +FL   + EH
Sbjct:   42 PPEPWRWPLLGHVLTLGKNPHLALTKMSQRYGDVLQIHIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYSFTLITDGQS-MSFSPDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAEALIGRLQELMAGPGRFDPYNQIVESVVKVIGAMCFGQHFPESS-DEMLSLMKNSHVFVENATSGNPV----DFFPILRYLP-NPALQRFKAFNQRFLRFLRETVQEH 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A2_BALAC (Cytochrome P450 1A2 OS=Balaenoptera acutorostrata GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 65/242 (26.86%), Postives = 103/242 (42.56%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPK------TAAGKYTTFNYSDITWSPYGPYWRQARKIC-----SMELFSVKRLESFEYIRV---QELNLFLNRLYESFGKPTILK--DHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEH 813
            PPGP  WP+IG++  +G  PH +L  LS++YG ++Q++ G  PV+V S  +  +  L  Q   F GRP        A G+  TFN         GP W   R++      S  + S     S  Y+ +   +E    + +  E           DH+      +I  M  G+ +   Q   E+V+    T    E       +D     P L +L     ++K K+  +RF +FL  ++ EH
Sbjct:   42 PPGPWSWPLIGHVLTLGKSPHLALSRLSQRYGDVLQIRIGCTPVLVLSGLDTIRQALVRQGDDFKGRPDLYSFTLVADGQSMTFNPDS------GPVWAAQRRLAQNALNSFSVASDPASSSSCYLEMHVSKEAEALIGKFQELMAGSGRFDPYDHVVVSVAKVIGAMCFGQHF--PQSSGEMVSLVRNTHDFVETASSGSPVDF---FPILKYLP-NPALQKYKSFNRRFLQFLWKMVQEH 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C5081_DICDI (Probable cytochrome P450 508A1 OS=Dictyostelium discoideum GN=cyp508a1-1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 59/250 (23.60%), Postives = 118/250 (47.20%), Query Frame = 1
Query:  142 GPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQ-ELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNG---VLDVGDSIPWLGFLDLQGNIKKMKALAK-RFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQ 876
            GP P PI+GNLH  G LPHR L  +++KYG I+++       VV S   + + +      +F+ R K  + ++ TF +  +T   YG +W+  R+I    +        +E +  Q ++ +   +  E+ GK    + +++  +++ + + +      + +  N+  T Q+    + E+F   G   + DV +    L  L L+   +  K + K   +K+ EH+        K  +  V +D++D+L++
Sbjct:   33 GPTPIPILGNLHQFGELPHRVLTKMTKKYGHILRVYMADMYTVVVSDPLLIREMYVDNSDIFTDRVKKPSVEHGTFYHGTVT--SYGEHWKNNREIVGKAMRKTNLKHIYELLDKQVDVLIRSMKSIETSGKTFDTRYYITKFTMSAMFKFLFNHDIPEDEDINKGDT-QKLMGPMSEVFQNAGRGSLFDVINITQPLYLLYLEMFDQSFKDIMKYHREKYNEHL--------KTFDPDVERDLLDILIK 271          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP1A4_CHICK (Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 64/238 (26.89%), Postives = 106/238 (44.54%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKIC--SMELFSVKRLESF-------EYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLA-IISRMVLGKKY--TDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEH 813
            PPGP+  P++GN+  +   PH  L  LS KYG +M++  GS PVVV S  E  K  L  Q   F GRP   + +Y +  +S       G  W+  RK+   +++ FS+    +        E++  +   L    L     K +   +    +S+A +I  +  GK+Y   D++L + V    EF  +           +  D IP L +L  +  +   K +  RF  F++ ++  H
Sbjct:   51 PPGPRGLPMLGNVLELRKDPHLVLTRLSRKYGDVMEVTIGSRPVVVLSGLETIKQALVRQAEDFMGRPDLPSWQYVSNGHSLAFSYECGDAWKARRKLAQNALKTFSIAASPTASSSCLLEEHVSTEASYLVTKFLQLMEEKQSFNPNSYLMVSVANVICAICFGKRYDHDDQELLSVVNMNTEFGDVA-------AAGNPADFIPLLRYLPNRA-MAAFKDVNARFSAFVQKIVQNH 280          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 61/250 (24.40%), Postives = 106/250 (42.40%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGS--LPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSV-KRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQ 876
            PP    +P+IG+L  + S   PH     L +KYG    L  G   V++ +  + AK +L  +  +F+GRP+T      T +  DI ++ YG  WR  RK     L    +   S E I  +E     + L ES      L   L+     ++  +     Y     E E +   +F+  + +    + ++D+    PWL       +++ +K      DK L+   +EH   +     +  +D++D LL+
Sbjct:   34 PPSLPVFPLIGSLLSLRSNQAPHVLFQKLQQKYGHTYSLMMGPHTVILVNHHQHAKEVLLKKGKIFAGRPRTVTTDLLTRDGKDIAFADYGATWRFHRKTVHGALCMFGEGSASIEKIICREALSLCDTLRESGSASLDLSPELTRAVTNVVCSLCFSSSYCRGDPEFEAML--QFSQGIVDTVAKDSLVDI---FPWLQVFP-NADLRLLKQCVSIRDKLLQKKYEEH---KSDYSDHEQRDLLDALLR 274          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C519E_DICDI (Probable cytochrome P450 519E1 OS=Dictyostelium discoideum GN=cyp519e1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 62/248 (25.00%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRL--YESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLL 873
            P  P   P++G+LHL GS PHRSL  L++K+G I  L  G    +V +   + + +       F  R  + + +  + N  DI++S  G  W+  R+  S  L   K L     I  ++ N  +N +  Y   G+P     + +  ++ I+  +   K  ++ +   E    Q      + L  L G  ++GD + W          KK++   K+   FLE + +EH    K ++    +D++D L+
Sbjct:   31 PKQPLAIPVLGHLHLFGSQPHRSLTELAKKFGGIFTLWMGDERSMVITDPNILRELYVKNHLNFYNRASSESIRIYSGNLVDISFS-VGESWKNRRRYVSAALTKTKVLNVITLIE-EQANFLINSMQYYAKSGEPFFPHKYYNKYTMNIVMSIGFSKTISENESVEEGPISQLIIPFYNILENL-GSGNLGDYV-WYTQPFFYFKNKKLEQDTKKVYTFLEEIYNEH---IKNLDESNPRDLMDQLI 271          
The following BLAST results are available for this feature:
BLAST of FC877781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
CP1A2_PONAB2.577e-1124.28Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2... [more]
CP1A2_HUMAN2.577e-1125.30Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1... [more]
CP1A2_CALJA2.577e-1126.16Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A... [more]
CP1A2_BALAC2.577e-1126.86Cytochrome P450 1A2 OS=Balaenoptera acutorostrata ... [more]
C5081_DICDI4.395e-1123.60Probable cytochrome P450 508A1 OS=Dictyostelium di... [more]
CP1A4_CHICK5.741e-1126.89Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=... [more]
CP17A_ONCMY9.792e-1124.40Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]
C519E_DICDI9.792e-1125.00Probable cytochrome P450 519E1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877781 ID=FC877781; Name=FC877781; organism=Citrus clementina; type=EST; length=902bp
CTCCGATACACTAAAGCTAGTTTTACAACTATGGAGCTCATTCATCCCTC
TTGGGCTTCCTACTTGGTCGCTTGGCTAGCAACCCTTGCCCTAGTCCTCC
TCTCCCTCCGTCTCAGGCGCCGGAAACTCAACTTGCCGCCAGGCCCGAAA
CCCTGGCCAATCATTGGAAACCTCCACCTCATCGGCTCACTTCCCCATCG
CTCCCTCCATGCGTTGTCCGAAAAATATGGGCCCATTATGCAGCTTAAAT
TCGGGTCATTCCCCGTTGTCGTGGGCTCTTCCGCTGAGATGGCTAAGGTT
ATCCTCAAAACCCAAGATGCACTGTTTTCTGGCCGCCCCAAAACAGCAGC
CGGCAAGTACACAACCTTCAATTACTCAGATATTACTTGGTCACCTTATG
GACCATACTGGCGTCAGGCTCGTAAAATTTGTTCAATGGAATTGTTTAGT
GTTAAACGCCTCGAATCATTTGAGTACATAAGAGTACAAGAATTGAACTT
ATTTCTCAATCGCTTGTATGAATCATTCGGCAAGCCAACTATATTGAAAG
ATCATCTTTCGGATTTGAGTCTTGCTATTATAAGCCGTATGGTTTTGGGG
AAGAAATACACAGACAAGCAGCTCGAAAATGAGGTTGTGACACCGCAAGA
GTTCACGGCAATGGTTGATGAATTGTTCATGCTTAATGGGGTTTTAGATG
TCGGCGATTCGATTCCTTGGCTAGGGTTTTTGGATTTGCAAGGTAATATA
AAGAAAATGAAGGCTTTGGCTAAGAGGTTTGACAAGTTTTTGGAGCATGT
GCTGGATGAACATGACGCTAGAAGAAAAGGTGTCGAATATTATGTGGCTA
AAGATATGGTGGATGTGCTTTTGCAGCTTGCTGATGATCTCACTCTTGAA
GT
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