FC877781

Overview
NameFC877781
Unique NameFC877781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length902
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11683 contig Ccv1_Contig11683:19..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.824e-31
Identity = 84/254 (33.07%), Postives = 130/254 (51.18%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESF--GKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIP--WLGFLD--LQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PP P   P+IGNLH +G LPHRS   L+E+ G +M L  G  PV V SS E A+ +L+T D     RP     +  +  + D+ ++PYG  W++ R+    ELF  K+L+SF YI+  E N  + +L ES     P  L   L  L+ +I+ R+  G+ +     E+E     +   +V E     G     D  P   LG+L   + G  K++  +  + D  L+HV+D+H    +  ++   KD+VDV+L +
Sbjct:   31 PPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFGQSFH----ESEFTDTDKIDELVFETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKLDALLQHVIDDHSNPGRSKDH---KDIVDVMLDV 277          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.824e-31
Identity = 80/230 (34.78%), Postives = 122/230 (53.04%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLN--RLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFL--DLQGNIKKMKALAKRFDKFLEHVLDEH 813
            PPGP   PIIGNLH +GS P RSL  LSEKYG +M LKFG+   VV S+ E  K +LKT DA    RP        T+N++D+ +SPY  YWR+ RK+  +EL++ KR++SF+ +R +E+  F++  + + S  K   +K  L  LS ++I ++  G      +L N       +  ++     + G     D  P +G +   + G   K + + K  D F +  +  H
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFNDLAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLEWSKLAN------TYEEVIQGTMEVVGRFAAADYFPIIGRIIDRITGLHSKCEKVFKEMDSFFDQSIKHH 253          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.522e-31
Identity = 85/252 (33.73%), Postives = 132/252 (52.38%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFL--NRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFL--DLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PPGP   PIIGNLH +G  PHR++  LS+ YGP+M LK GS   VV +S E  + +LKT D     RP        T+N  D+ +SPY  YWRQ RK+  +EL++ KR++SF +IR +E+  F+  N+   S  +   L   +  +S ++I R+  G      +LEN   T QE   ++ + F + G L   D  P +G +   + G   K + +    D F +  +  H       +  +  D++D+LL++
Sbjct:   30 PPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLEGSKLEN---TYQE---IIVQAFEVLGSLAAVDYFPVIGTIIDRITGLHAKCEKVFHGIDSFFDQAIQRHID-----DPSIKDDIIDLLLKM 270          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.519e-31
Identity = 83/251 (33.07%), Postives = 131/251 (52.19%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGK--PTILKDHLSDLSLAIISRMVLGKKYTD-KQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PPGP   PI+GNLH +  + HR LH LS+K+GP+M L+ G  P+V+ SS+E A+  LKT D     RP T A +  + N  +I    Y   WR+ RK+   E FSVK+++SF Y+R +E +L + +L +   K  P  L   L  L+ + + R V G+ ++D K    E +    F A     F  + +  +     ++GF  + G  K +  +    D FL H++D+H  + +  +     D+V  LL +
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIEELVFEAQKSLTFKFSDLFPIPGLGWFIGF--VSGQHKGLHKVFIEVDNFLNHMIDDHQKQNQPQD---RSDIVGSLLDM 278          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.237e-30
Identity = 86/256 (33.59%), Postives = 133/256 (51.95%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSL-PHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGK--PTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLD-LQGNIKKMKALAKRFDKFLEHVLDEH-DARRKGVEYYVAKDMVDVLLQLADD 888
            PPGPK  PIIGNLH +    P   L  LS+ YGPI  +K G   + V SSAE+AK +LKTQD  F+ RP     +  ++   ++ +  Y  Y+R+ RK+C + LFS  R+ SF  +R +E    ++++Y++  +     L + L   +  ++ R   GK+Y +   E      + F  ++ E   L G L   D  P+ GFLD L G   ++K   K  D +L+ +LDE  D  R   E    +  +D+L+Q+  D
Sbjct:   30 PPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTE-----MKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQE---TESFIDLLMQIYKD 277          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.228e-30
Identity = 84/257 (32.68%), Postives = 130/257 (50.58%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYE--SFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFL--DLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADDLT 894
            PPGP   PI+GN+H +GSLPHRSL  LS KYGP++ +  GS   VV  S E A+ +LK  D+    RPK +  K   ++   + ++ +G Y+R  RK+C +ELFSVKR  SF  IR +EL+  +N   +  S G    L  +L+    +   RM  G  +    ++NE      F  +  E   + G     D  P  G++   + G     +   +  D F +  + +H  ++K  +    +D++DVLL+L    T
Sbjct:   37 PPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNET-----FLELFTEANRVIGKFAAADIFPGFGWILDRISGLDSSRRKSFQDLDTFYQKAIVDHREKKKTED---REDLIDVLLKLQSQET 285          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.522e-30
Identity = 88/243 (36.21%), Postives = 128/243 (52.67%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQ-DALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRL--YESFGKPT------ILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGN--IKKMKALAKRFDKFLEHVLDEHDARRKG 831
            PPGP   P +G+LHL+    HR L   S +YGPI  L+FGS  VVV +S  +A+     Q D + S RP     KY  +N++ +  +PYG +WR  R+ICS E+ S  RL +F++IR  E+   L RL  Y      +       L+  LSDL+   I RMV GK+Y    + N+    + F  +V ++ M +G     D +P    L L GN   K++KA+ K  D  L+ +LDE    ++G
Sbjct:   29 PPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNK-EEAELFKKLVYDIAMYSGANHSADYLP---ILKLFGNKFEKEVKAIGKSMDDILQRLLDECRRDKEG 267          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.522e-30
Identity = 81/253 (32.02%), Postives = 133/253 (52.57%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLI-GSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQEFTAMVDELFMLNGVLDVGDSIPWLGFLDLQ-GNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQLADD 888
            PPGP   P++G+LHL+ G LP  ++  +++KYGP+  ++ G    VV SS E  K  +K  D   + R ++   +   ++  DI +SPY  +WRQ RKIC  EL S + + SF +IR  E++  L  L  S G+   + + ++ L+ +II R   G    D +   E+V         D L M +G  ++ D  P    L+L   N  K+  + +R D  LE ++DEH  ++ G   +  +D++DVL ++  D
Sbjct:   35 PPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGETVDMTERIATLTCSIICRAAFGAIINDHEELVELVK--------DSLSMASG-FELADLFPSSKLLNLLCWNKSKLWRMRRRVDTILEAIVDEHKLKKSG--EFGGEDIIDVLFRMQKD 276          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.522e-30
Identity = 89/257 (34.63%), Postives = 143/257 (55.64%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLYESFGKPTI--LKDHLSDLSLAIISRMVLG-----KKYTDKQLENEVVTPQEFTAMVDELF--MLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHDARRKGVEYYVAKDMVDVLLQL 879
            PPGPK  PIIGNLH    L  R+   LSEKYGPI+ L++G  PVVV SS E A+ +LKT D     RP+T   +  ++N+ DI ++PYG  WR  RK+  +ELFS K+L+SF YIR +E +L + +L +   + ++  L+  L  L  +I+ R+  G      ++ D+   +++V   E   + + +F     G++  G  I W     +    K++  L    D F +++LD+H   + G E   + D++DV++ +
Sbjct:   29 PPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEFVDEDSIDDLVHKSE-DVIRNSIFSDFFPGLM--GRLIEW-----IFSERKRLNRLYSEVDTFFQNILDDH--LKPGRE---SSDIIDVMIDM 272          
BLAST of FC877781 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.607e-29
Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 1
Query:  136 PPGPKPWPIIGNLHLIGSLPHRSLHALSEKYGPIMQLKFGSFPVVVGSSAEMAKVILKTQDALFSGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKICSMELFSVKRLESFEYIRVQELNLFLNRLY------ESFGKPTILKDHLSDLSLAIISRMVLGKKYTDKQLENEVVTPQ--EFTAMVDELFMLNGVLDVGDSIPWLGFLDLQGNIKKMKALAKRFDKFLEHVLDEHD-ARRKGVEYYVAKDMVDVLLQLADDLTL 897
            PPGP P PI+GNL+ I  +  R  +  ++ YGPI+ +  GS   VV SSAE+AK +LK  D   + R +  + +  + N  D+ W+ YGP++ + RK+C++ELF+ KRLES   IR  E+   +  ++      E+  K   L+ +L  ++   I+R+  GK++ + +    VV  Q  EF A+V     L   L + + IPWL ++    + K       R D+    +++EH  AR+K       +  VD LL L D   L
Sbjct:   28 PPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAE---GVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLRWM-FPADEKAFAEHGARRDRLTRAIMEEHTLARQKSSG--AKQHFVDALLTLKDQYDL 284          
The following BLAST results are available for this feature:
BLAST of FC877781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
C71BH_ARATH3.824e-3133.07Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH3.824e-3134.78Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR6.522e-3133.73Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BP_ARATH8.519e-3133.07Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH3.237e-3033.59Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71B6_ARATH4.228e-3032.68Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C81F1_ARATH5.522e-3036.21Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP5.522e-3032.02Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71BS_ARATH5.522e-3034.63Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH1.607e-2932.70Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA24CC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877781 ID=FC877781; Name=FC877781; organism=Citrus clementina; type=EST; length=902bp
CTCCGATACACTAAAGCTAGTTTTACAACTATGGAGCTCATTCATCCCTC
TTGGGCTTCCTACTTGGTCGCTTGGCTAGCAACCCTTGCCCTAGTCCTCC
TCTCCCTCCGTCTCAGGCGCCGGAAACTCAACTTGCCGCCAGGCCCGAAA
CCCTGGCCAATCATTGGAAACCTCCACCTCATCGGCTCACTTCCCCATCG
CTCCCTCCATGCGTTGTCCGAAAAATATGGGCCCATTATGCAGCTTAAAT
TCGGGTCATTCCCCGTTGTCGTGGGCTCTTCCGCTGAGATGGCTAAGGTT
ATCCTCAAAACCCAAGATGCACTGTTTTCTGGCCGCCCCAAAACAGCAGC
CGGCAAGTACACAACCTTCAATTACTCAGATATTACTTGGTCACCTTATG
GACCATACTGGCGTCAGGCTCGTAAAATTTGTTCAATGGAATTGTTTAGT
GTTAAACGCCTCGAATCATTTGAGTACATAAGAGTACAAGAATTGAACTT
ATTTCTCAATCGCTTGTATGAATCATTCGGCAAGCCAACTATATTGAAAG
ATCATCTTTCGGATTTGAGTCTTGCTATTATAAGCCGTATGGTTTTGGGG
AAGAAATACACAGACAAGCAGCTCGAAAATGAGGTTGTGACACCGCAAGA
GTTCACGGCAATGGTTGATGAATTGTTCATGCTTAATGGGGTTTTAGATG
TCGGCGATTCGATTCCTTGGCTAGGGTTTTTGGATTTGCAAGGTAATATA
AAGAAAATGAAGGCTTTGGCTAAGAGGTTTGACAAGTTTTTGGAGCATGT
GCTGGATGAACATGACGCTAGAAGAAAAGGTGTCGAATATTATGTGGCTA
AAGATATGGTGGATGTGCTTTTGCAGCTTGCTGATGATCTCACTCTTGAA
GT
back to top