FC877782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.767e-22 Identity = 66/157 (42.04%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 60 RRSSVSDPFSLDVW---DPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKE--DKNDT-WHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 R +V DP S+D W DPF G +L+ + P + N RVDWKETP AHVF ADLPG+ L ISG+R E++ KND WH VERSSG F RRFRLP ++DQ+ ASM++G AI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPF-------GAVRSLAERCP----VLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21 Identity = 56/125 (44.80%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 93 DVW-----DPFR---DFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 D+W DPFR PF A + P ARVDWKETPE HV D+PGL L++SG+RK E+E K D WHRVERS G F R+FRLP+NV +D +KA +E+G Sbjct: 35 DLWSDRFPDPFRVLEHIPFGVDKDEASMAMSP--------ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENG 151
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21 Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 3 Query: 33 SLIPSFFGNRRSSVSDPFSLDVWDPFRDFP-FPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 SL+P F + + +SD +S DPFR P G S + +ARVDWKETPE HV D+PGL L++SG+RK E++ K D WHRVERS G F R+F+LP+NV +D +KA ME+G Sbjct: 29 SLLP-FIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPS------ITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENG 159
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.968e-19 Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 93 DVWDPFRDFPFPSGYSSALSSQFPPETSAVVN-ARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 D+W FP P + +TS ++ ARVDWKET E H D+PGL L++SG+RK E+E K D WHRVERS G F R+F+LP+NV M+ +KA +E+G Sbjct: 40 DLW--LDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENG 155
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18 Identity = 45/73 (61.64%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 294 LQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 512 LQISG+R +EKEDKNDTWHRVERSSG F R FRLP+N K+DQ+KASME+G AIEISG Sbjct: 2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17 Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 3 Query: 78 DPFSLDVWDPFRDF----PFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 +P S+D+ +PF D F + S+A ++ P T A +DWKET AHVF AD+PG+ L+ISGQR E+K + WHRVERSS F R RLP N D + A++++G Sbjct: 34 EPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPST-----ASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNG 154
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14 Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 3 Query: 78 DPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLP-GLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 D + D W+PF F G + A + +TSA N ++ +ET EA+VF+ADLP G+ L I+G+R + +E+K H +ERS F RF LP++ +D ++ASM+ G Sbjct: 8 DTLAFDAWNPFSIF----GTTVAADAWLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGG 126
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.197e-13 Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 33 SLIPSFFGN--RRSSVSDPFSLDVWDPFRDFPF-PSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRK----IEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 +L+P F G R +V + L DPFR P G+ + + + ARVDW+ET +AH D+PG+ L+ISG+R+ E++ D WHR ERS G F R+ RLP+N +D I AS+++G Sbjct: 28 ALLPWFGGGGARDEAVPELGLLAAADPFRILEHVPFGFDR-------DDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNG 164
BLAST of FC877782 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.391e-13 Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 33 SLIPSFFGNRRSSVSDPFSLDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGL-XXXXXXXXXXXXXXLQISGQRK-----IEKEDKND--TWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 443 +L+P +G + DPF + P R P+G +A ++ P +AV AR DWKETPEAHV D+PG+ L++SG+R+ E+E + D WHR ER++G F RRFR+P + ++ A ++ G Sbjct: 29 ALVPYGYGYM---LDDPFRVLEQSPLR----PAGGVAAAAAAGEP--AAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDG 164 The following BLAST results are available for this feature:
BLAST of FC877782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877782 ID=FC877782; Name=FC877782; organism=Citrus clementina; type=EST; length=675bpback to top |