FC877791

Overview
NameFC877791
Unique NameFC877791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 73/224 (32.59%), Postives = 107/224 (47.77%), Query Frame = 3
Query:  168 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            E   +SF+RAV AEF              + + +           G   +L IA AFG ++  +V     +SG HINPAVTF   +G ++SL RA+ Y+ AQ LGA+ G   +     +   R     N L  G + G     EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARSF  AV+    + + + W++WVG
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAA-----------GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAI-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVG 207          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +  ++     + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWV 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 3
Query:  168 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            EL   +F RAV+AEF+A            + + S               +L IA AFG  I ILV     +SG HINPAVT    +G  VS +RA  Y+ AQ LGA+ G   +         R     N L +    G  +  E+  T  LV  +F++TD +R            L IGF+V + HL  I  TG  +NPARS   AV+  K   +DD W+FW+G
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPP-----------SVLQIAVAFGLGIGILVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEI-RGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIG 207          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.711e-23
Identity = 67/186 (36.02%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELA---------DGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G LG+A AFG  +F   Y    ISGGH NPAV+FGL++G++    +   Y+ AQ LGAI    F+    +   N    G+N LA          GY     L  E + TF+ +  +   TD    A        AP  IG A+ ++HL +IPIT T +NPARS G A+           W+FW+
Sbjct:   40 GLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWL 219          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.711e-23
Identity = 78/224 (34.82%), Postives = 104/224 (46.43%), Query Frame = 3
Query:  168 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            EL   +F RAV+AEF+A            + + S               +L IA AFG  I  LV     +SG HINPAVT    +G  VS +RA  Y+ AQ LGA+ G   +         R     N L +    G  +  E+  T  LV  +F++TD +RS           L IGF+V + HL  I  TG  +NPARS   AV+  K   +DD W+FW+G
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALQWASSPP-----------SVLQIAVAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEI-RGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIG 207          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23
Identity = 78/224 (34.82%), Postives = 109/224 (48.66%), Query Frame = 3
Query:  192 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGHSLELSL 860
            RA I+EFIA            +         +  D     G++ +A A    + + V     ISGGH+NPAVTFG  +G +VSL+RA+LY VAQ LGA+     ++        R  G A  LA G      +  E + TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P  G G+NPAR FG A++  +   W   W++W+G  L   L
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGK-----MYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM--RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGL 233          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.625e-23
Identity = 75/224 (33.48%), Postives = 109/224 (48.66%), Query Frame = 3
Query:  168 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G +       EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF  A++    + + + W++WVG
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVG 207          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 74/224 (33.04%), Postives = 108/224 (48.21%), Query Frame = 3
Query:  168 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L    + G     EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF  A++      + + W++WVG
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVG 207          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22
Identity = 68/183 (37.16%), Postives = 95/183 (51.91%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G LG+A AFG  +  + Y   GISGGH NPAV+  L +  ++     + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    W+FWV
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWV 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.346e-22
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +  +V     + Y++AQ  GAI      +V A  K+ +      AN   +    GY+    L  E++ TF  +  +  +T  +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQA-LFVGGWALSQLWLFWI 208          
The following BLAST results are available for this feature:
BLAST of FC877791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
MIP_RANPI2.076e-2332.59Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQPZ_BRUME2.076e-2337.70Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQP2_RAT2.076e-2334.82Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
AQPZ_SYNY32.711e-2336.02Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
AQP2_MOUSE2.711e-2334.82Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP31_MAIZE3.541e-2334.82Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
MIP_CAVPO4.625e-2333.48Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_HUMAN6.040e-2333.04Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQPZ_BRUSU1.030e-2237.16Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQPZ2_RHIME1.346e-2233.88Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877791 ID=FC877791; Name=FC877791; organism=Citrus clementina; type=EST; length=862bp
CACACAGTCGTAGCTCTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAA
AATAAAAGGGAAAAAATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGG
CGGCGGCGGCGAGTTCTCAGCCAAGGACTACCACGACCCCCCTCCGGCGC
CGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTA
ATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGAC
TGTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGT
GTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATC
TTCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCC
GGCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAG
CTCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGG
TTTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGC
CAATGAGCTAGCTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGA
TCATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCT
AAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCTTGGCACCACTCCCCAT
TGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGAA
CCGGCATCAACCCAGCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAG
GAGAAAGCCTGGGATGACCAATGGATCTTCTGGGTTGGACATTCATTGGA
GCTTTCGTTGCT
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