FC877791

Overview
NameFC877791
Unique NameFC877791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.164e-20
Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAIC-------------GCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G++G++ AFG  +  + Y    ISG H+NPAVT GL  G +    + L Y++AQ  GAI              G    K F  + Y+ +  G       Y+       E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IP+T T +NPARS G A ++    A    W+FWV
Sbjct:   34 GIGLVGVSLAFGLSVVTMAYAIGHISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 3
Query:  309 VGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            VG+  +A A   ++ ++V     +SGGHINPAVT GL    +++L R+ LY+ AQ LG+   C  + AF     +  G   + L  G     G+  E + TF L++ V+ +  DP+R+     V  + PL +G  V    LA  P +G  +NPARSFG A++      W D W++WVG
Sbjct:   54 VGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLAC-LLLAFLAVADS--GVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRA-----VGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAG---VWADHWVYWVG 220          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 72/222 (32.43%), Postives = 106/222 (47.75%), Query Frame = 3
Query:  192 RAVIAEFIAXXXXXXXXXXXXIG-YKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGAN----ELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI-YNKEKAWDDQWIFWVG 839
            RA ++EF+A             G +K   D    T   GG+ ++ +A A    +   V  +   SGGH+NPAVTFG+ +GR++S  RA LY  AQ LGA+     ++           GG       L    ++   L  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NPAR+FG A++ +N    W   W++W+G
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRD----TGTLGGLLVVAVAHALA--LAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN----WRHHWVYWLG 228          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G  G+A AFG  +  + Y   GISGGH NPAV+ GL +  +      + Y++AQ  GAI      +V A  K+  +  G  +N   +    GY+  + L  EII T   +  +  +T  +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A ++    A    W+FW+
Sbjct:   33 GIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWL 208          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_SHIFL (Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC-----------GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+ G +      + Y++AQ +G I              GF  A      N YG        GY+  + L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG---EHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOLI (Aquaporin Z OS=Escherichia coli (strain K12) GN=aqpZ PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC-----------GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+ G +      + Y++AQ +G I              GF  A      N YG        GY+  + L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG---EHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC-----------GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+ G +      + Y++AQ +G I              GF  A      N YG        GY+  + L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG---EHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 62/188 (32.98%), Postives = 89/188 (47.34%), Query Frame = 3
Query:  306 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC-----------GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWV 836
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+ G +      + Y++AQ +G I              GF  A      N YG        GY+  + L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NPARS  A  I+    A +  W FWV
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG---EHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARS-TAVAIFQGGWALEQLWFFWV 210          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  294 DQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIG---TFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            D  G  G+L  A A    +   VY +  +SGGH+NPAVTF + +  ++S+  A+ Y  +Q + ++  C  +K      +      A E+       TG GA ++     FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA +FG+A++Y   K   +Q ++WVG
Sbjct:   53 DVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-------TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVG 223          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 63/177 (35.59%), Postives = 90/177 (50.85%), Query Frame = 3
Query:  327 AWAFGGMIFILVYCTAG--ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            A A    + + V  TAG  +SGGH+NPAVT  L +G  ++L R+ LY+ AQ  G+   C  ++          GG A   + LADG     G+ AE + TF L+  + +   DP+R+A     P   PL  G  V    +A   +TG  +NPARSFG A+   +   W   W++WVG
Sbjct:   62 AAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAA----PPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGE---WAHHWVYWVG 224          
The following BLAST results are available for this feature:
BLAST of FC877791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
AQPZ_BRAJA8.164e-2032.63Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP44_MAIZE1.066e-1935.39Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP32_ORYSJ1.066e-1932.43Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ2_AGRT51.066e-1933.88Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
AQPZ_SHIFL2.375e-1932.98Aquaporin Z OS=Shigella flexneri GN=aqpZ PE=3 SV=2[more]
AQPZ_ECOLI2.375e-1932.98Aquaporin Z OS=Escherichia coli (strain K12) GN=aq... [more]
AQPZ_ECOL62.375e-1932.98Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO572.375e-1932.98Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP51_ARATH9.026e-1933.87Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP42_ORYSJ9.026e-1935.59Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877791 ID=FC877791; Name=FC877791; organism=Citrus clementina; type=EST; length=862bp
CACACAGTCGTAGCTCTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAA
AATAAAAGGGAAAAAATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGG
CGGCGGCGGCGAGTTCTCAGCCAAGGACTACCACGACCCCCCTCCGGCGC
CGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTA
ATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGAC
TGTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGT
GTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATC
TTCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCC
GGCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAG
CTCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGG
TTTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGC
CAATGAGCTAGCTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGA
TCATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCT
AAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCTTGGCACCACTCCCCAT
TGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGAA
CCGGCATCAACCCAGCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAG
GAGAAAGCCTGGGATGACCAATGGATCTTCTGGGTTGGACATTCATTGGA
GCTTTCGTTGCT
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