FC877791

Overview
NameFC877791
Unique NameFC877791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16
Identity = 60/175 (34.29%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +L IA  F       V  +   SG H NPAVT    +G  +SL RA+ Y+ AQ  GA  G   +         R   G N + +  + G  +  E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARSFG AVI  K   +   WIFWVG
Sbjct:   52 VLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGI-RETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLAS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVG 216          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 52/167 (31.14%), Postives = 80/167 (47.90%), Query Frame = 3
Query:  339 GGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G  +  L++  +G+SG ++NPAVT    L  +V LI +L Y+ AQ LG I G G +     + Y R   G   LA G N G     E++ T +L   V   +    +  D  +  +AP  IG A+F+        +G  +NP R  G ++I      W   W++W+G
Sbjct:   77 GMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSII---SGVWSHHWVYWLG 237          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 55/178 (30.90%), Postives = 87/178 (48.88%), Query Frame = 3
Query:  312 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G+L  A A G  + +++     ISGGH NPAV+  + +   +  +  + Y ++Q  G + G    K    ++ ++N  G     + +       LG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD  WI+W+G
Sbjct:   64 GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAG---YWDFHWIYWLG 233          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 55/178 (30.90%), Postives = 87/178 (48.88%), Query Frame = 3
Query:  312 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAF--QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G+L  A A G  + +++     ISGGH NPAV+  + +   +  +  + Y ++Q  G + G    K    ++ ++N  G     + +       LG EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+FG AV+      WD  WI+W+G
Sbjct:   64 GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLG 233          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 59/175 (33.71%), Postives = 82/175 (46.86%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +L +A  F       V  +   SG H NPAVT    +G  +SL RA+ Y+ AQ  GA  G   +         R   G N + +  + G  +  E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NPARSFG AVI  K   +   WIFWVG
Sbjct:   52 VLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGV-RETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVG 216          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15
Identity = 60/179 (33.52%), Postives = 84/179 (46.93%), Query Frame = 3
Query:  315 ILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            + G+A A      +LV     +SGGH+NPAVT  L     ++  R+ LY+ AQ L +   C  ++          GG A   + L  G     GL  EII TF L++ V++   DP+     S VP   PL  G  V    +A    +G  +NPARSFG A+       W   WI+W+G
Sbjct:   58 LAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLT-------GGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPR-----SSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG---VWTHHWIYWLG 221          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 55/173 (31.79%), Postives = 85/173 (49.13%), Query Frame = 3
Query:  321 GIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIF 830
            GIA  +G ++ +LVY    ISGGH NPAVT      R+  LI+   Y+VAQ LG+I   G ++      ++++ G           GT L A   E I TF L++ +       R+     V   A + IG  + +  +   P+TG  +NPARS G A ++ +   ++  WI+
Sbjct:   72 GIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSGTV-------PNGTNLQAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGE---YEGIWIY 229          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 52/184 (28.26%), Postives = 88/184 (47.83%), Query Frame = 3
Query:  303 GGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAF----QKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            G V   GI   +G ++ ++VY    ISG H NPAVT    +  +    +  LY++AQ +G+I   G +        ++Y+     G+N        G  L  EII +F+L++ +   ATD      D  +  +A + +G  + +      PI+G  +NPARS G A++   +  +   W++ VG
Sbjct:   70 GSVTFPGICVTWGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSN--------GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIV---KHVYTGLWVYVVG 236          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13
Identity = 59/189 (31.22%), Postives = 90/189 (47.62%), Query Frame = 3
Query:  306 GVGILG-------IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG-FVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGA---AVIYNKEKAWDDQWIFWVG 839
            G+G+LG       I  AFG  I   +Y    ISG HINPAVT GL+  +K      + Y++AQ LGA  G   F++          G GA     G +    + AE++GTF+L+ T+      +R+ +       A + IG  V  +      I+G+ +NPAR+FG     +I+     W+   I+ +G
Sbjct:   45 GIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIG 228          
BLAST of FC877791 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 51/185 (27.57%), Postives = 86/185 (46.49%), Query Frame = 3
Query:  285 LNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVG 839
            +N  + G +   G+A  +G  + ++VY    ISG H NPAVT       +    +   Y++AQ LGA    G ++      +  + G    L  G ++   L  EII TF L++ +       R+     +  LA L +G  + +  L   P++G  +NPARS G A++  +   +   W++ VG
Sbjct:   66 INASKNGQITFPGVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPG---TLPTG-SEVQSLVIEIITTFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVG 238          
The following BLAST results are available for this feature:
BLAST of FC877791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
AQP6_MOUSE9.340e-1634.29Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
AQPA_DICDI1.593e-1531.14Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
AQP8_NOTAL1.593e-1530.90Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE1.593e-1530.90Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP6_RAT2.081e-1533.71Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
TIP41_ORYSJ7.907e-1533.52Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
NO26_SOYBN1.349e-1431.79Nodulin-26 OS=Glycine max PE=1 SV=2[more]
NIP1_NICAL9.666e-1328.26Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
AQPM_METTM9.666e-1331.22Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
NIP11_MAIZE1.262e-1227.57Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877791 ID=FC877791; Name=FC877791; organism=Citrus clementina; type=EST; length=862bp
CACACAGTCGTAGCTCTTGTTTCTCCCTCTCGTTTAATTAACAAAACAAA
AATAAAAGGGAAAAAATGGGGAAGGATGTTGAAGTTGCTGAGCAGCAAGG
CGGCGGCGGCGAGTTCTCAGCCAAGGACTACCACGACCCCCCTCCGGCGC
CGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTCTTTTTACAGAGCTGTA
ATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGAC
TGTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGT
GTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATC
TTCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCC
GGCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAG
CTCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGG
TTTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGC
CAATGAGCTAGCTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGA
TCATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCT
AAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCTTGGCACCACTCCCCAT
TGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACCGGAA
CCGGCATCAACCCAGCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAG
GAGAAAGCCTGGGATGACCAATGGATCTTCTGGGTTGGACATTCATTGGA
GCTTTCGTTGCT
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