FC877799

Overview
NameFC877799
Unique NameFC877799
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_FLAJ1 (Chaperone protein dnaK OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 110/222 (49.55%), Postives = 144/222 (64.86%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERM 727
            ++RA+FE+L+  L ++ MEPV K L+D+ +  S + +V+LVGGSTR+P++   ++ FF GK+  K +NPDE           +LSG+    V+D           GIET GGV+T LI  NTTIPTKK Q+FST +D+QP V I V +GERA   DN  +G+F L GIPPAPRGVPQI V FDIDANGI+ VSA DK  G  + I I    G L+ EEIE+M
Sbjct:  294 LSRAKFEQLSDTLVKRSMEPVAKALKDAGLSTSDIDEVILVGGSTRMPRIADEVEKFF-GKKASKGVNPDEVVAIGAAIQGGVLSGD----VKDVLLLDVTPLSLGIETMGGVLTKLIESNTTIPTKKSQVFSTAADSQPSVEIHVLQGERAMAADNKTIGRFHLDGIPPAPRGVPQIEVTFDIDANGIIKVSATDKGTGKSHDIRIEASSG-LTAEEIEKM 509
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOUT (Chaperone protein dnaK OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLI (Chaperone protein dnaK OS=Escherichia coli (strain K12) GN=dnaK PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOLC (Chaperone protein dnaK OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL6 (Chaperone protein dnaK OS=Escherichia coli O6 GN=dnaK PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOL5 (Chaperone protein dnaK OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOK1 (Chaperone protein dnaK OS=Escherichia coli O1:K1 / APEC GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECOHS (Chaperone protein dnaK OS=Escherichia coli O9:H4 (strain HS) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECO57 (Chaperone protein dnaK OS=Escherichia coli O157:H7 GN=dnaK PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
[Close]
BLAST of FC877799 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.156e-52
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 2 
Query:   62 ITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQ 733
            +TRA+ E L  DL  + +EP++  L+D+ +  S + DV+LVGG TR+P VQ+ + +FF GKE  K +NPDE           +L+G+    V+D           GIET GGVMTTLI +NTTIPTK  Q+FST  DNQ  V I V +GER R  DN  LG+F L GI PAPRG+PQI V FDIDA+GILHVSA+DK +G + +ITI    G L+++EI++MV+
Sbjct:  300 VTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVR 517
The following BLAST results are available for this feature:
BLAST of FC877799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_FLAJ16.156e-5249.55Chaperone protein dnaK OS=Flavobacterium johnsonia... [more]
DNAK_ECOUT6.156e-5249.55Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLI6.156e-5249.55Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOLC6.156e-5249.55Chaperone protein dnaK OS=Escherichia coli (strain... [more]
DNAK_ECOL66.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O6 GN=d... [more]
DNAK_ECOL56.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O6:K15:... [more]
DNAK_ECOK16.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O1:K1 /... [more]
DNAK_ECOHS6.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O9:H4 (... [more]
DNAK_ECO576.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O157:H7... [more]
DNAK_ECO246.156e-5249.55Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA12AG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12AG05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877799 ID=FC877799; Name=FC877799; organism=Citrus clementina; type=EST; length=857bp
TACATCACAGACGACAATTGAGATTGATTCGCTCTATGAAGGCATTGACT
TCTATGCGACAATTACTAGGGCTAGGTTTGAAGAATTGAACATGGATTTG
TTCAGAAAATGTATGGAACCTGTGGAGAAATGTCTTCGCGACTCAAAAAT
TGATAAGAGCCAGGTTCATGATGTTGTTCTTGTTGGTGGCTCAACAAGAA
TTCCAAAAGTTCAACAATTGTTGCAAGACTTCTTTAACGGGAAGGAACTG
TGCAAGAGCATAAACCCTGATGAGGCTGTAGCTTATGGAGCTGCTGTGCA
GGCTGCTATTTTGAGCGGTGAAGGGAATGAGAAGGTTCAAGATTTGCTGC
TGCTTGATGTTACTCCTCTGAGCCTCGGTATTGAGACTGCTGGCGGTGTA
ATGACAACCTTGATTCCAAGGAACACGACAATTCCTACAAAGAAAGAGCA
AATTTTCTCAACTTATTCAGACAATCAGCCTGGTGTGTTGATTCAGGTGT
ATGAAGGTGAAAGGGCTAGAACAAAAGATAACAATCTGCTTGGGAAATTC
GAGCTCACGGGCATTCCTCCGGCACCAAGAGGTGTTCCTCAGATCAATGT
GTGCTTTGACATTGATGCTAATGGTATATTGCATGTCTCAGCAGAAGATA
AGACTGCTGGAGTGAAGAACCAGATTACAATCACCAACGATAAGGGAAGA
TTGAGCAAGGAGGAAATTGAGAGAATGGTGCAAGAGGCAGAGAAGTACAA
GGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGAGGCCAAGAACTCATTGG
AGAATTATGCTTATAACATGAGGAACACTGTGAGAGATGAGAAGATTGCG
GGAAAAC
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